Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.67■□□□□ 0.42
Ctdnep1Q3TP92 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Ctdnep1Q3TP92 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctdnep1Q3TP92 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctdnep1Q3TP92 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctdnep1Q3TP92 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctdnep1Q3TP92 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctdnep1Q3TP92 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctdnep1Q3TP92 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctdnep1Q3TP92 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ctdnep1Q3TP92 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.67■□□□□ 0.42
Ctdnep1Q3TP92 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Gm15173-201ENSMUST00000122049 433 ntBASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Gm18489-201ENSMUST00000172565 551 ntBASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Gm37153-201ENSMUST00000193637 231 ntBASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Gm5864-201ENSMUST00000202263 970 ntBASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ctdnep1Q3TP92 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Gm13884-201ENSMUST00000118103 829 ntBASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Gm6550-201ENSMUST00000187574 993 ntBASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.65■□□□□ 0.42
Ctdnep1Q3TP92 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.64■□□□□ 0.42
Ctdnep1Q3TP92 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.64■□□□□ 0.42
Ctdnep1Q3TP92 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Ctdnep1Q3TP92 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ctdnep1Q3TP92 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ctdnep1Q3TP92 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ctdnep1Q3TP92 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ctdnep1Q3TP92 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ctdnep1Q3TP92 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.64■□□□□ 0.41
Ctdnep1Q3TP92 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctdnep1Q3TP92 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.64■□□□□ 0.41
Ctdnep1Q3TP92 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctdnep1Q3TP92 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.64■□□□□ 0.41
Ctdnep1Q3TP92 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ctdnep1Q3TP92 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Ctdnep1Q3TP92 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ctdnep1Q3TP92 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.64■□□□□ 0.41
Ctdnep1Q3TP92 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctdnep1Q3TP92 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ctdnep1Q3TP92 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctdnep1Q3TP92 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctdnep1Q3TP92 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ctdnep1Q3TP92 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ctdnep1Q3TP92 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ctdnep1Q3TP92 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ctdnep1Q3TP92 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ctdnep1Q3TP92 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctdnep1Q3TP92 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ctdnep1Q3TP92 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctdnep1Q3TP92 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctdnep1Q3TP92 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctdnep1Q3TP92 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctdnep1Q3TP92 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ctdnep1Q3TP92 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms