Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pkd1l3Q2EG98 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pkd1l3Q2EG98 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pkd1l3Q2EG98 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Thap2-203ENSMUST00000218989 527 ntBASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Gm11745-201ENSMUST00000121669 448 ntBASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Pkd1l3Q2EG98 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Pkd1l3Q2EG98 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pkd1l3Q2EG98 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pkd1l3Q2EG98 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Pkd1l3Q2EG98 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pkd1l3Q2EG98 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.71□□□□□ -0.22
Pkd1l3Q2EG98 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pkd1l3Q2EG98 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pkd1l3Q2EG98 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pkd1l3Q2EG98 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Pkd1l3Q2EG98 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pkd1l3Q2EG98 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pkd1l3Q2EG98 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pkd1l3Q2EG98 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Pkd1l3Q2EG98 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Pkd1l3Q2EG98 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms