Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col9a1Q05722 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col9a1Q05722 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.95□□□□□ -0.02
Col9a1Q05722 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col9a1Q05722 Gm14201-201ENSMUST00000117627 289 ntBASIC14.95□□□□□ -0.02
Col9a1Q05722 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col9a1Q05722 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.95□□□□□ -0.02
Col9a1Q05722 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.95□□□□□ -0.02
Col9a1Q05722 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.95□□□□□ -0.02
Col9a1Q05722 Gm7584-201ENSMUST00000175829 940 ntBASIC14.95□□□□□ -0.02
Col9a1Q05722 Gm38216-201ENSMUST00000194872 1214 ntBASIC14.95□□□□□ -0.02
Col9a1Q05722 Gm43822-201ENSMUST00000200285 476 ntBASIC14.95□□□□□ -0.02
Col9a1Q05722 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC14.95□□□□□ -0.02
Col9a1Q05722 Gm9182-201ENSMUST00000217829 639 ntBASIC14.95□□□□□ -0.02
Col9a1Q05722 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.95□□□□□ -0.02
Col9a1Q05722 AC132446.1-201ENSMUST00000222655 226 ntBASIC14.95□□□□□ -0.02
Col9a1Q05722 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
Col9a1Q05722 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col9a1Q05722 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col9a1Q05722 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Col9a1Q05722 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col9a1Q05722 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Col9a1Q05722 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col9a1Q05722 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col9a1Q05722 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col9a1Q05722 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a1Q05722 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a1Q05722 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a1Q05722 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.94□□□□□ -0.02
Col9a1Q05722 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Col9a1Q05722 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a1Q05722 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a1Q05722 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Col9a1Q05722 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.94□□□□□ -0.02
Col9a1Q05722 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a1Q05722 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a1Q05722 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.94□□□□□ -0.02
Col9a1Q05722 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a1Q05722 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Col9a1Q05722 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a1Q05722 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a1Q05722 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a1Q05722 Gm9522-201ENSMUST00000182394 926 ntBASIC14.94□□□□□ -0.02
Col9a1Q05722 Gm28760-201ENSMUST00000185995 736 ntBASIC14.94□□□□□ -0.02
Col9a1Q05722 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.94□□□□□ -0.02
Col9a1Q05722 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a1Q05722 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a1Q05722 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.94□□□□□ -0.02
Col9a1Q05722 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Col9a1Q05722 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Col9a1Q05722 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a1Q05722 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a1Q05722 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a1Q05722 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a1Q05722 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a1Q05722 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a1Q05722 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col9a1Q05722 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.93□□□□□ -0.02
Col9a1Q05722 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a1Q05722 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a1Q05722 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a1Q05722 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a1Q05722 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a1Q05722 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a1Q05722 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a1Q05722 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a1Q05722 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.93□□□□□ -0.02
Col9a1Q05722 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.93□□□□□ -0.02
Col9a1Q05722 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.93□□□□□ -0.02
Col9a1Q05722 Gm16107-201ENSMUST00000162523 862 ntBASIC14.93□□□□□ -0.02
Col9a1Q05722 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.93□□□□□ -0.02
Col9a1Q05722 Gm27731-201ENSMUST00000185192 107 ntBASIC14.93□□□□□ -0.02
Col9a1Q05722 Gm10766-202ENSMUST00000194123 606 ntBASIC14.93□□□□□ -0.02
Col9a1Q05722 Gm3961-201ENSMUST00000204425 994 ntBASIC14.93□□□□□ -0.02
Col9a1Q05722 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.93□□□□□ -0.02
Col9a1Q05722 CT010431.1-201ENSMUST00000221249 1080 ntBASIC14.93□□□□□ -0.02
Col9a1Q05722 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.93□□□□□ -0.02
Col9a1Q05722 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a1Q05722 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a1Q05722 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.93□□□□□ -0.02
Col9a1Q05722 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a1Q05722 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Col9a1Q05722 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.93□□□□□ -0.02
Col9a1Q05722 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Col9a1Q05722 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col9a1Q05722 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a1Q05722 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a1Q05722 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.92□□□□□ -0.02
Col9a1Q05722 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a1Q05722 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Col9a1Q05722 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a1Q05722 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a1Q05722 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a1Q05722 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a1Q05722 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Col9a1Q05722 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Col9a1Q05722 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Col9a1Q05722 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a1Q05722 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col9a1Q05722 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms