Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PrkdcP97313 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC10.32□□□□□ -0.76
PrkdcP97313 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PrkdcP97313 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PrkdcP97313 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC10.32□□□□□ -0.76
PrkdcP97313 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
PrkdcP97313 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.32□□□□□ -0.76
PrkdcP97313 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.32□□□□□ -0.76
PrkdcP97313 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.32□□□□□ -0.76
PrkdcP97313 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.32□□□□□ -0.76
PrkdcP97313 Gm46209-201ENSMUST00000217912 553 ntBASIC10.32□□□□□ -0.76
PrkdcP97313 Gm9229-201ENSMUST00000222777 126 ntBASIC10.32□□□□□ -0.76
PrkdcP97313 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC10.32□□□□□ -0.76
PrkdcP97313 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PrkdcP97313 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
PrkdcP97313 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC10.32□□□□□ -0.76
PrkdcP97313 Gm6756-201ENSMUST00000180647 1620 ntBASIC10.32□□□□□ -0.76
PrkdcP97313 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PrkdcP97313 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PrkdcP97313 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.32□□□□□ -0.76
PrkdcP97313 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PrkdcP97313 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PrkdcP97313 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
PrkdcP97313 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.32□□□□□ -0.76
PrkdcP97313 Gm8463-201ENSMUST00000208573 613 ntBASIC10.32□□□□□ -0.76
PrkdcP97313 Gm45930-201ENSMUST00000221330 292 ntBASIC10.32□□□□□ -0.76
PrkdcP97313 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
PrkdcP97313 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
PrkdcP97313 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PrkdcP97313 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PrkdcP97313 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.32□□□□□ -0.76
PrkdcP97313 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PrkdcP97313 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC10.31□□□□□ -0.76
PrkdcP97313 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.31□□□□□ -0.76
PrkdcP97313 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.31□□□□□ -0.76
PrkdcP97313 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.31□□□□□ -0.76
PrkdcP97313 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC10.31□□□□□ -0.76
PrkdcP97313 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC10.31□□□□□ -0.76
PrkdcP97313 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.31□□□□□ -0.76
PrkdcP97313 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.31□□□□□ -0.76
PrkdcP97313 Gm45453-201ENSMUST00000211758 853 ntBASIC10.31□□□□□ -0.76
PrkdcP97313 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 CT010506.4-201ENSMUST00000225457 351 ntBASIC10.31□□□□□ -0.76
PrkdcP97313 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.31□□□□□ -0.76
PrkdcP97313 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PrkdcP97313 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PrkdcP97313 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PrkdcP97313 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PrkdcP97313 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.3□□□□□ -0.76
PrkdcP97313 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
PrkdcP97313 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PrkdcP97313 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC10.3□□□□□ -0.76
PrkdcP97313 Gm37714-201ENSMUST00000194742 342 ntBASIC10.3□□□□□ -0.76
PrkdcP97313 Gm5356-201ENSMUST00000093326 615 ntBASIC10.3□□□□□ -0.76
PrkdcP97313 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
PrkdcP97313 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PrkdcP97313 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC10.3□□□□□ -0.76
PrkdcP97313 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PrkdcP97313 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.3□□□□□ -0.76
PrkdcP97313 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PrkdcP97313 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PrkdcP97313 Prkcz2-201ENSMUST00000206136 1756 ntBASIC10.3□□□□□ -0.76
PrkdcP97313 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.3□□□□□ -0.76
PrkdcP97313 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PrkdcP97313 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
PrkdcP97313 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PrkdcP97313 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC10.3□□□□□ -0.76
PrkdcP97313 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PrkdcP97313 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PrkdcP97313 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.3□□□□□ -0.76
PrkdcP97313 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.3□□□□□ -0.76
PrkdcP97313 Gm37259-201ENSMUST00000193903 849 ntBASIC10.3□□□□□ -0.76
PrkdcP97313 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC10.3□□□□□ -0.76
PrkdcP97313 Gm16476-201ENSMUST00000221544 139 ntBASIC10.3□□□□□ -0.76
PrkdcP97313 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PrkdcP97313 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
PrkdcP97313 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
PrkdcP97313 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PrkdcP97313 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms