Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim43cP86449 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trim43cP86449 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trim43cP86449 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim43cP86449 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43cP86449 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43cP86449 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43cP86449 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43cP86449 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim43cP86449 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Trim43cP86449 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43cP86449 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim43cP86449 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43cP86449 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trim43cP86449 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.63■□□□□ 0.25
Trim43cP86449 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.63■□□□□ 0.25
Trim43cP86449 Mir5126-201ENSMUST00000175513 77 ntBASIC16.63■□□□□ 0.25
Trim43cP86449 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim43cP86449 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Trim43cP86449 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43cP86449 Gm27628-201ENSMUST00000184911 107 ntBASIC16.63■□□□□ 0.25
Trim43cP86449 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43cP86449 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43cP86449 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43cP86449 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43cP86449 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43cP86449 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43cP86449 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43cP86449 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43cP86449 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43cP86449 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43cP86449 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Trim43cP86449 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43cP86449 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim43cP86449 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Trim43cP86449 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43cP86449 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim43cP86449 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim43cP86449 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim43cP86449 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43cP86449 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43cP86449 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43cP86449 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trim43cP86449 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43cP86449 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43cP86449 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43cP86449 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim43cP86449 Mir5131-201ENSMUST00000175426 93 ntBASIC16.62■□□□□ 0.25
Trim43cP86449 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43cP86449 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.62■□□□□ 0.25
Trim43cP86449 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trim43cP86449 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trim43cP86449 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trim43cP86449 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43cP86449 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.62■□□□□ 0.25
Trim43cP86449 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43cP86449 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43cP86449 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43cP86449 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43cP86449 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim43cP86449 Celf4-206ENSMUST00000224553 1729 ntBASIC16.62■□□□□ 0.25
Trim43cP86449 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43cP86449 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43cP86449 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43cP86449 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim43cP86449 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43cP86449 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43cP86449 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43cP86449 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim43cP86449 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43cP86449 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43cP86449 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43cP86449 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.61■□□□□ 0.25
Trim43cP86449 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43cP86449 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.61■□□□□ 0.25
Trim43cP86449 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.61■□□□□ 0.25
Trim43cP86449 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.61■□□□□ 0.25
Trim43cP86449 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43cP86449 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.61■□□□□ 0.25
Trim43cP86449 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43cP86449 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43cP86449 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43cP86449 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43cP86449 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43cP86449 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43cP86449 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43cP86449 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Trim43cP86449 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.61■□□□□ 0.25
Trim43cP86449 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim43cP86449 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Trim43cP86449 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms