Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm3P62311 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.03□□□□□ -0.16
Lsm3P62311 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lsm3P62311 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm3P62311 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm3P62311 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Lsm3P62311 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Lsm3P62311 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm3P62311 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm3P62311 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm3P62311 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm3P62311 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Lsm3P62311 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm3P62311 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lsm3P62311 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm3P62311 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm3P62311 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm3P62311 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm3P62311 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm3P62311 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm3P62311 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm3P62311 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm3P62311 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lsm3P62311 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Lsm3P62311 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Lsm3P62311 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Lsm3P62311 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.01□□□□□ -0.17
Lsm3P62311 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm3P62311 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lsm3P62311 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm3P62311 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm3P62311 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lsm3P62311 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm3P62311 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm3P62311 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm3P62311 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm3P62311 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.01□□□□□ -0.17
Lsm3P62311 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm3P62311 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm3P62311 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm3P62311 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.01□□□□□ -0.17
Lsm3P62311 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm3P62311 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.01□□□□□ -0.17
Lsm3P62311 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lsm3P62311 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm3P62311 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm3P62311 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lsm3P62311 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm3P62311 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm3P62311 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lsm3P62311 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14□□□□□ -0.17
Lsm3P62311 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Lsm3P62311 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14□□□□□ -0.17
Lsm3P62311 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14□□□□□ -0.17
Lsm3P62311 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Lsm3P62311 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14□□□□□ -0.17
Lsm3P62311 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Lsm3P62311 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Lsm3P62311 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14□□□□□ -0.17
Lsm3P62311 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Lsm3P62311 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Lsm3P62311 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lsm3P62311 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14□□□□□ -0.17
Lsm3P62311 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm3P62311 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm3P62311 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.99□□□□□ -0.17
Lsm3P62311 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm3P62311 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm3P62311 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm3P62311 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm3P62311 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm3P62311 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Lsm3P62311 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm3P62311 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm3P62311 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm3P62311 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Lsm3P62311 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lsm3P62311 Gm3807-201ENSMUST00000193520 1168 ntBASIC13.99□□□□□ -0.17
Lsm3P62311 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Lsm3P62311 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms