Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.52□□□□□ -0.25
Sec61a1P61620 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.52□□□□□ -0.25
Sec61a1P61620 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.52□□□□□ -0.25
Sec61a1P61620 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.52□□□□□ -0.25
Sec61a1P61620 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.52□□□□□ -0.25
Sec61a1P61620 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Sec61a1P61620 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a1P61620 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a1P61620 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a1P61620 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a1P61620 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a1P61620 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a1P61620 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a1P61620 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a1P61620 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a1P61620 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.52□□□□□ -0.25
Sec61a1P61620 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a1P61620 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a1P61620 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a1P61620 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sec61a1P61620 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Sec61a1P61620 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a1P61620 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a1P61620 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a1P61620 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a1P61620 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a1P61620 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a1P61620 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a1P61620 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a1P61620 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Sec61a1P61620 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Sec61a1P61620 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.51□□□□□ -0.25
Sec61a1P61620 Gm10052-201ENSMUST00000168019 960 ntBASIC13.51□□□□□ -0.25
Sec61a1P61620 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.51□□□□□ -0.25
Sec61a1P61620 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a1P61620 Gm7729-201ENSMUST00000050143 801 ntBASIC13.51□□□□□ -0.25
Sec61a1P61620 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a1P61620 Spr-ps1-201ENSMUST00000089584 605 ntBASIC13.51□□□□□ -0.25
Sec61a1P61620 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Sec61a1P61620 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a1P61620 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a1P61620 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Sec61a1P61620 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a1P61620 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Sec61a1P61620 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.51□□□□□ -0.25
Sec61a1P61620 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a1P61620 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a1P61620 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sec61a1P61620 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.5□□□□□ -0.25
Sec61a1P61620 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.5□□□□□ -0.25
Sec61a1P61620 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Sec61a1P61620 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.5□□□□□ -0.25
Sec61a1P61620 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.5□□□□□ -0.25
Sec61a1P61620 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.5□□□□□ -0.25
Sec61a1P61620 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sec61a1P61620 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Sec61a1P61620 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Sec61a1P61620 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Sec61a1P61620 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Sec61a1P61620 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sec61a1P61620 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sec61a1P61620 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.49□□□□□ -0.25
Sec61a1P61620 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.49□□□□□ -0.25
Sec61a1P61620 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sec61a1P61620 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sec61a1P61620 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sec61a1P61620 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Sec61a1P61620 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.49□□□□□ -0.25
Sec61a1P61620 Gm24589-201ENSMUST00000116692 94 ntBASIC13.49□□□□□ -0.25
Sec61a1P61620 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.49□□□□□ -0.25
Sec61a1P61620 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Sec61a1P61620 Gm36967-201ENSMUST00000193814 266 ntBASIC13.49□□□□□ -0.25
Sec61a1P61620 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.49□□□□□ -0.25
Sec61a1P61620 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sec61a1P61620 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sec61a1P61620 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sec61a1P61620 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Sec61a1P61620 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms