Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Cks1bP61025 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1bP61025 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1bP61025 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1bP61025 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1bP61025 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1bP61025 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1bP61025 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Cks1bP61025 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1bP61025 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Cks1bP61025 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1bP61025 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1bP61025 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1bP61025 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1bP61025 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1bP61025 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1bP61025 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1bP61025 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cks1bP61025 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cks1bP61025 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cks1bP61025 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC10.94□□□□□ -0.66
Cks1bP61025 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC10.94□□□□□ -0.66
Cks1bP61025 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC10.94□□□□□ -0.66
Cks1bP61025 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC10.94□□□□□ -0.66
Cks1bP61025 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
Cks1bP61025 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 AC135637.1-201ENSMUST00000227750 365 ntBASIC10.94□□□□□ -0.66
Cks1bP61025 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Cks1bP61025 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC10.94□□□□□ -0.66
Cks1bP61025 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Gm38197-201ENSMUST00000192320 2122 ntBASIC10.94□□□□□ -0.66
Cks1bP61025 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.94□□□□□ -0.66
Cks1bP61025 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.94□□□□□ -0.66
Cks1bP61025 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cks1bP61025 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cks1bP61025 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Actl10-202ENSMUST00000226583 1501 ntBASIC10.94□□□□□ -0.66
Cks1bP61025 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cks1bP61025 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Cks1bP61025 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Cks1bP61025 Gfra2-202ENSMUST00000227633 1480 ntBASIC10.93□□□□□ -0.66
Cks1bP61025 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Cks1bP61025 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cks1bP61025 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cks1bP61025 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Cks1bP61025 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Cks1bP61025 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Cks1bP61025 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Cks1bP61025 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Gm5643-201ENSMUST00000117081 966 ntBASIC10.93□□□□□ -0.66
Cks1bP61025 Gm5297-201ENSMUST00000198555 1171 ntBASIC10.93□□□□□ -0.66
Cks1bP61025 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC10.93□□□□□ -0.66
Cks1bP61025 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC10.93□□□□□ -0.66
Cks1bP61025 Timm23-208ENSMUST00000226683 750 ntBASIC10.93□□□□□ -0.66
Cks1bP61025 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Cks1bP61025 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Cks1bP61025 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC10.93□□□□□ -0.66
Cks1bP61025 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.93□□□□□ -0.66
Cks1bP61025 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms