Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b6P59708 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b6P59708 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.61□□□□□ -0.23
Sf3b6P59708 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Sf3b6P59708 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Sf3b6P59708 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b6P59708 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sf3b6P59708 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b6P59708 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.61□□□□□ -0.23
Sf3b6P59708 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b6P59708 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.61□□□□□ -0.23
Sf3b6P59708 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Sf3b6P59708 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b6P59708 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b6P59708 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b6P59708 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.61□□□□□ -0.23
Sf3b6P59708 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b6P59708 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b6P59708 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b6P59708 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3b6P59708 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b6P59708 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.6□□□□□ -0.23
Sf3b6P59708 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b6P59708 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.6□□□□□ -0.23
Sf3b6P59708 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.6□□□□□ -0.23
Sf3b6P59708 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Sf3b6P59708 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b6P59708 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b6P59708 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b6P59708 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b6P59708 Gm5587-201ENSMUST00000206270 674 ntBASIC13.6□□□□□ -0.23
Sf3b6P59708 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.6□□□□□ -0.23
Sf3b6P59708 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b6P59708 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b6P59708 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b6P59708 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b6P59708 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b6P59708 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b6P59708 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sf3b6P59708 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b6P59708 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b6P59708 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b6P59708 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b6P59708 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sf3b6P59708 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sf3b6P59708 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sf3b6P59708 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b6P59708 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b6P59708 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b6P59708 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b6P59708 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b6P59708 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sf3b6P59708 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b6P59708 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b6P59708 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b6P59708 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b6P59708 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sf3b6P59708 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b6P59708 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.59□□□□□ -0.23
Sf3b6P59708 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Sf3b6P59708 Gm23547-201ENSMUST00000158210 271 ntBASIC13.59□□□□□ -0.23
Sf3b6P59708 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.59□□□□□ -0.23
Sf3b6P59708 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.59□□□□□ -0.23
Sf3b6P59708 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.59□□□□□ -0.23
Sf3b6P59708 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.59□□□□□ -0.23
Sf3b6P59708 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b6P59708 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sf3b6P59708 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.59□□□□□ -0.23
Sf3b6P59708 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.59□□□□□ -0.23
Sf3b6P59708 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b6P59708 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b6P59708 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b6P59708 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.59□□□□□ -0.23
Sf3b6P59708 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b6P59708 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b6P59708 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b6P59708 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sf3b6P59708 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.58□□□□□ -0.23
Sf3b6P59708 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sf3b6P59708 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3b6P59708 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.58□□□□□ -0.24
Sf3b6P59708 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3b6P59708 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Sf3b6P59708 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3b6P59708 Gm14722-201ENSMUST00000118943 689 ntBASIC13.58□□□□□ -0.24
Sf3b6P59708 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Sf3b6P59708 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3b6P59708 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3b6P59708 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
Sf3b6P59708 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3b6P59708 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3b6P59708 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3b6P59708 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.58□□□□□ -0.24
Sf3b6P59708 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3b6P59708 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3b6P59708 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.58□□□□□ -0.24
Sf3b6P59708 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.58□□□□□ -0.24
Sf3b6P59708 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3b6P59708 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sf3b6P59708 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms