Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh11P55288 Gm12644-201ENSMUST00000119935 606 ntBASIC13.98□□□□□ -0.17
Cdh11P55288 Gm15372-201ENSMUST00000120729 834 ntBASIC13.98□□□□□ -0.17
Cdh11P55288 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.98□□□□□ -0.17
Cdh11P55288 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh11P55288 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cdh11P55288 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.98□□□□□ -0.17
Cdh11P55288 Mzt1-203ENSMUST00000227948 952 ntBASIC13.98□□□□□ -0.17
Cdh11P55288 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh11P55288 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cdh11P55288 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Cdh11P55288 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh11P55288 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh11P55288 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cdh11P55288 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh11P55288 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh11P55288 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh11P55288 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Cdh11P55288 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Cdh11P55288 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdh11P55288 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cdh11P55288 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Cdh11P55288 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
Cdh11P55288 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdh11P55288 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.97□□□□□ -0.17
Cdh11P55288 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Cdh11P55288 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Cdh11P55288 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Cdh11P55288 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Cdh11P55288 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh11P55288 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh11P55288 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh11P55288 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh11P55288 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh11P55288 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh11P55288 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh11P55288 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cdh11P55288 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.96□□□□□ -0.17
Cdh11P55288 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh11P55288 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.96□□□□□ -0.17
Cdh11P55288 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh11P55288 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh11P55288 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh11P55288 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.96□□□□□ -0.17
Cdh11P55288 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Cdh11P55288 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.96□□□□□ -0.17
Cdh11P55288 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.96□□□□□ -0.17
Cdh11P55288 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.96□□□□□ -0.17
Cdh11P55288 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh11P55288 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh11P55288 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh11P55288 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.96□□□□□ -0.18
Cdh11P55288 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.18
Cdh11P55288 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cdh11P55288 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cdh11P55288 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cdh11P55288 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdh11P55288 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.96□□□□□ -0.18
Cdh11P55288 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdh11P55288 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.96□□□□□ -0.18
Cdh11P55288 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cdh11P55288 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh11P55288 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh11P55288 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh11P55288 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh11P55288 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh11P55288 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh11P55288 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh11P55288 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.95□□□□□ -0.18
Cdh11P55288 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh11P55288 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh11P55288 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh11P55288 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh11P55288 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms