Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdkn2bP55271 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.69□□□□□ -0.06
Cdkn2bP55271 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdkn2bP55271 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdkn2bP55271 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdkn2bP55271 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdkn2bP55271 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdkn2bP55271 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkn2bP55271 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Gm8344-201ENSMUST00000119813 856 ntBASIC14.68□□□□□ -0.06
Cdkn2bP55271 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkn2bP55271 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.68□□□□□ -0.06
Cdkn2bP55271 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cdkn2bP55271 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdkn2bP55271 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.67□□□□□ -0.06
Cdkn2bP55271 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.67□□□□□ -0.06
Cdkn2bP55271 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Grk6-207ENSMUST00000225925 2769 ntBASIC14.67□□□□□ -0.06
Cdkn2bP55271 Gm23634-201ENSMUST00000175071 91 ntBASIC14.67□□□□□ -0.06
Cdkn2bP55271 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.67□□□□□ -0.06
Cdkn2bP55271 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.67□□□□□ -0.06
Cdkn2bP55271 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.67□□□□□ -0.06
Cdkn2bP55271 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.67□□□□□ -0.06
Cdkn2bP55271 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Cdkn2bP55271 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Gm25745-201ENSMUST00000174945 133 ntBASIC14.66□□□□□ -0.06
Cdkn2bP55271 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.66□□□□□ -0.06
Cdkn2bP55271 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdkn2bP55271 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cdkn2bP55271 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms