Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Abcd3P55096 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Abcd3P55096 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.71□□□□□ -0.21
Abcd3P55096 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC13.71□□□□□ -0.21
Abcd3P55096 Gm8318-201ENSMUST00000182954 872 ntBASIC13.71□□□□□ -0.21
Abcd3P55096 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.71□□□□□ -0.21
Abcd3P55096 Gm34391-201ENSMUST00000203706 907 ntBASIC13.71□□□□□ -0.21
Abcd3P55096 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.71□□□□□ -0.21
Abcd3P55096 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abcd3P55096 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Abcd3P55096 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Abcd3P55096 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Abcd3P55096 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Abcd3P55096 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Abcd3P55096 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Abcd3P55096 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd3P55096 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd3P55096 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd3P55096 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd3P55096 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd3P55096 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.7□□□□□ -0.22
Abcd3P55096 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Abcd3P55096 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd3P55096 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd3P55096 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.7□□□□□ -0.22
Abcd3P55096 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd3P55096 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Abcd3P55096 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.7□□□□□ -0.22
Abcd3P55096 Gm13418-201ENSMUST00000119097 944 ntBASIC13.7□□□□□ -0.22
Abcd3P55096 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd3P55096 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.7□□□□□ -0.22
Abcd3P55096 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.7□□□□□ -0.22
Abcd3P55096 Gm43347-201ENSMUST00000200226 580 ntBASIC13.7□□□□□ -0.22
Abcd3P55096 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd3P55096 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd3P55096 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd3P55096 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd3P55096 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.7□□□□□ -0.22
Abcd3P55096 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd3P55096 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd3P55096 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd3P55096 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd3P55096 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd3P55096 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abcd3P55096 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.7□□□□□ -0.22
Abcd3P55096 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.69□□□□□ -0.22
Abcd3P55096 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Abcd3P55096 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.69□□□□□ -0.22
Abcd3P55096 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Abcd3P55096 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Abcd3P55096 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Abcd3P55096 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.69□□□□□ -0.22
Abcd3P55096 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Birc2-201ENSMUST00000054878 378 ntBASIC13.69□□□□□ -0.22
Abcd3P55096 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Abcd3P55096 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Abcd3P55096 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Abcd3P55096 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Abcd3P55096 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abcd3P55096 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Abcd3P55096 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Abcd3P55096 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms