Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atxn1P54254 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atxn1P54254 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atxn1P54254 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atxn1P54254 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Atxn1P54254 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atxn1P54254 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atxn1P54254 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atxn1P54254 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Atxn1P54254 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.2■□□□□ 0.02
Atxn1P54254 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.2■□□□□ 0.02
Atxn1P54254 Gm5177-201ENSMUST00000183092 997 ntBASIC15.2■□□□□ 0.02
Atxn1P54254 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.2■□□□□ 0.02
Atxn1P54254 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.2■□□□□ 0.02
Atxn1P54254 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atxn1P54254 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atxn1P54254 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atxn1P54254 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atxn1P54254 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atxn1P54254 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atxn1P54254 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Atxn1P54254 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atxn1P54254 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Atxn1P54254 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atxn1P54254 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Atxn1P54254 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atxn1P54254 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atxn1P54254 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Atxn1P54254 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Atxn1P54254 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.19■□□□□ 0.02
Atxn1P54254 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Atxn1P54254 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.19■□□□□ 0.02
Atxn1P54254 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.19■□□□□ 0.02
Atxn1P54254 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Atxn1P54254 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.19■□□□□ 0.02
Atxn1P54254 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.19■□□□□ 0.02
Atxn1P54254 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.19■□□□□ 0.02
Atxn1P54254 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Atxn1P54254 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Atxn1P54254 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atxn1P54254 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
Atxn1P54254 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.18■□□□□ 0.02
Atxn1P54254 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atxn1P54254 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.18■□□□□ 0.02
Atxn1P54254 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Atxn1P54254 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.18■□□□□ 0.02
Atxn1P54254 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atxn1P54254 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Atxn1P54254 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atxn1P54254 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atxn1P54254 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atxn1P54254 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Atxn1P54254 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atxn1P54254 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atxn1P54254 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Atxn1P54254 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.18■□□□□ 0.02
Atxn1P54254 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.18■□□□□ 0.02
Atxn1P54254 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atxn1P54254 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atxn1P54254 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Atxn1P54254 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atxn1P54254 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atxn1P54254 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atxn1P54254 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.18■□□□□ 0.02
Atxn1P54254 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atxn1P54254 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atxn1P54254 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Atxn1P54254 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Atxn1P54254 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atxn1P54254 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atxn1P54254 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atxn1P54254 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atxn1P54254 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atxn1P54254 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Atxn1P54254 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atxn1P54254 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.17■□□□□ 0.02
Atxn1P54254 Gm9682-201ENSMUST00000197505 556 ntBASIC15.17■□□□□ 0.02
Atxn1P54254 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.17■□□□□ 0.02
Atxn1P54254 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms