Protein–RNA interactions for Protein: P51954

Nek1, Serine/threonine-protein kinase Nek1, mousemouse

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek1P51954 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Nek1P51954 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nek1P51954 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nek1P51954 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nek1P51954 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.07■□□□□ 0.32
Nek1P51954 Gm27525-201ENSMUST00000184465 107 ntBASIC17.07■□□□□ 0.32
Nek1P51954 Gm37935-201ENSMUST00000192012 982 ntBASIC17.07■□□□□ 0.32
Nek1P51954 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nek1P51954 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.07■□□□□ 0.32
Nek1P51954 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.07■□□□□ 0.32
Nek1P51954 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.07■□□□□ 0.32
Nek1P51954 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.07■□□□□ 0.32
Nek1P51954 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nek1P51954 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nek1P51954 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Efs-202ENSMUST00000227037 2540 ntBASIC17.06■□□□□ 0.32
Nek1P51954 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.06■□□□□ 0.32
Nek1P51954 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.06■□□□□ 0.32
Nek1P51954 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.06■□□□□ 0.32
Nek1P51954 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.06■□□□□ 0.32
Nek1P51954 Gm27867-201ENSMUST00000184778 125 ntBASIC17.06■□□□□ 0.32
Nek1P51954 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.06■□□□□ 0.32
Nek1P51954 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.06■□□□□ 0.32
Nek1P51954 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.06■□□□□ 0.32
Nek1P51954 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Nek1P51954 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nek1P51954 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nek1P51954 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nek1P51954 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.05■□□□□ 0.32
Nek1P51954 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.05■□□□□ 0.32
Nek1P51954 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nek1P51954 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nek1P51954 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nek1P51954 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Nek1P51954 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
Nek1P51954 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Nek1P51954 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Nek1P51954 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nek1P51954 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nek1P51954 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nek1P51954 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nek1P51954 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nek1P51954 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nek1P51954 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Nek1P51954 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nek1P51954 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nek1P51954 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Nek1P51954 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.04■□□□□ 0.32
Nek1P51954 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nek1P51954 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.04■□□□□ 0.32
Nek1P51954 Gm14722-201ENSMUST00000118943 689 ntBASIC17.04■□□□□ 0.32
Nek1P51954 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.04■□□□□ 0.32
Nek1P51954 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nek1P51954 Mir5131-201ENSMUST00000175426 93 ntBASIC17.04■□□□□ 0.32
Nek1P51954 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.04■□□□□ 0.32
Nek1P51954 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.04■□□□□ 0.32
Nek1P51954 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nek1P51954 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Nek1P51954 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms