Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RoraP51448 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RoraP51448 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RoraP51448 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
RoraP51448 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.49□□□□□ -0.09
RoraP51448 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RoraP51448 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RoraP51448 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RoraP51448 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RoraP51448 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RoraP51448 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RoraP51448 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RoraP51448 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RoraP51448 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RoraP51448 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RoraP51448 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.48□□□□□ -0.09
RoraP51448 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RoraP51448 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RoraP51448 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
RoraP51448 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 Gm13597-201ENSMUST00000121239 375 ntBASIC14.48□□□□□ -0.09
RoraP51448 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.48□□□□□ -0.09
RoraP51448 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
RoraP51448 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.48□□□□□ -0.09
RoraP51448 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 Grk6-207ENSMUST00000225925 2769 ntBASIC14.48□□□□□ -0.09
RoraP51448 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RoraP51448 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
RoraP51448 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RoraP51448 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.47□□□□□ -0.09
RoraP51448 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
RoraP51448 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.47□□□□□ -0.09
RoraP51448 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.47□□□□□ -0.09
RoraP51448 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
RoraP51448 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RoraP51448 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.47□□□□□ -0.09
RoraP51448 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RoraP51448 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RoraP51448 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RoraP51448 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.46□□□□□ -0.09
RoraP51448 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RoraP51448 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RoraP51448 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.46□□□□□ -0.09
RoraP51448 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
RoraP51448 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RoraP51448 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RoraP51448 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
RoraP51448 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RoraP51448 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RoraP51448 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RoraP51448 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RoraP51448 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RoraP51448 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RoraP51448 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.46□□□□□ -0.09
RoraP51448 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.46□□□□□ -0.09
RoraP51448 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
RoraP51448 Gm14722-201ENSMUST00000118943 689 ntBASIC14.46□□□□□ -0.09
RoraP51448 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
RoraP51448 Gm25925-201ENSMUST00000158314 306 ntBASIC14.46□□□□□ -0.09
RoraP51448 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RoraP51448 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms