Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.23■□□□□ 0.03
Krt6aP50446 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 Gm44454-201ENSMUST00000198541 138 ntBASIC15.23■□□□□ 0.03
Krt6aP50446 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Krt6aP50446 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.23■□□□□ 0.03
Krt6aP50446 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.23■□□□□ 0.03
Krt6aP50446 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt6aP50446 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt6aP50446 Efs-202ENSMUST00000227037 2540 ntBASIC15.22■□□□□ 0.03
Krt6aP50446 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt6aP50446 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Krt6aP50446 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.22■□□□□ 0.03
Krt6aP50446 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt6aP50446 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt6aP50446 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Krt6aP50446 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Krt6aP50446 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt6aP50446 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Krt6aP50446 Gm5357-201ENSMUST00000212720 1924 ntBASIC15.22■□□□□ 0.03
Krt6aP50446 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Krt6aP50446 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Krt6aP50446 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.22■□□□□ 0.03
Krt6aP50446 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt6aP50446 Mir3081-201ENSMUST00000175305 84 ntBASIC15.22■□□□□ 0.03
Krt6aP50446 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Krt6aP50446 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.22■□□□□ 0.03
Krt6aP50446 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt6aP50446 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt6aP50446 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt6aP50446 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt6aP50446 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt6aP50446 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Krt6aP50446 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.22■□□□□ 0.03
Krt6aP50446 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt6aP50446 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt6aP50446 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt6aP50446 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Krt6aP50446 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Krt6aP50446 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt6aP50446 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Krt6aP50446 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt6aP50446 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt6aP50446 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt6aP50446 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt6aP50446 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt6aP50446 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Krt6aP50446 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.21■□□□□ 0.03
Krt6aP50446 Gm19164-201ENSMUST00000210667 640 ntBASIC15.21■□□□□ 0.03
Krt6aP50446 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Krt6aP50446 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.21■□□□□ 0.03
Krt6aP50446 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.21■□□□□ 0.03
Krt6aP50446 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt6aP50446 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.21■□□□□ 0.03
Krt6aP50446 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt6aP50446 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt6aP50446 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt6aP50446 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt6aP50446 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Krt6aP50446 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt6aP50446 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Krt6aP50446 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt6aP50446 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt6aP50446 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt6aP50446 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Krt6aP50446 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt6aP50446 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt6aP50446 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt6aP50446 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Krt6aP50446 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt6aP50446 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Krt6aP50446 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt6aP50446 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt6aP50446 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt6aP50446 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Krt6aP50446 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.2■□□□□ 0.02
Krt6aP50446 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt6aP50446 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.2■□□□□ 0.02
Krt6aP50446 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt6aP50446 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt6aP50446 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Krt6aP50446 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt6aP50446 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt6aP50446 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt6aP50446 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Krt6aP50446 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Krt6aP50446 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms