Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx3P48381 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx3P48381 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx3P48381 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx3P48381 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.86□□□□□ -0.19
Rfx3P48381 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.86□□□□□ -0.19
Rfx3P48381 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx3P48381 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx3P48381 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx3P48381 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx3P48381 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Rfx3P48381 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx3P48381 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx3P48381 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.86□□□□□ -0.19
Rfx3P48381 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx3P48381 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx3P48381 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx3P48381 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.86□□□□□ -0.19
Rfx3P48381 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.86□□□□□ -0.19
Rfx3P48381 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx3P48381 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rfx3P48381 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.85□□□□□ -0.19
Rfx3P48381 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Rfx3P48381 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.85□□□□□ -0.19
Rfx3P48381 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.85□□□□□ -0.19
Rfx3P48381 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.85□□□□□ -0.19
Rfx3P48381 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx3P48381 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx3P48381 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx3P48381 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx3P48381 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx3P48381 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx3P48381 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.84□□□□□ -0.19
Rfx3P48381 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx3P48381 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.84□□□□□ -0.19
Rfx3P48381 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.84□□□□□ -0.19
Rfx3P48381 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.84□□□□□ -0.19
Rfx3P48381 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx3P48381 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.84□□□□□ -0.19
Rfx3P48381 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.84□□□□□ -0.19
Rfx3P48381 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rfx3P48381 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx3P48381 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx3P48381 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.84□□□□□ -0.19
Rfx3P48381 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx3P48381 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx3P48381 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx3P48381 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Rfx3P48381 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Rfx3P48381 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx3P48381 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.84□□□□□ -0.19
Rfx3P48381 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rfx3P48381 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Rfx3P48381 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rfx3P48381 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx3P48381 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx3P48381 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx3P48381 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Rfx3P48381 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Rfx3P48381 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Rfx3P48381 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx3P48381 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx3P48381 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx3P48381 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.83□□□□□ -0.2
Rfx3P48381 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.83□□□□□ -0.2
Rfx3P48381 Gm9172-201ENSMUST00000212092 954 ntBASIC13.83□□□□□ -0.2
Rfx3P48381 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx3P48381 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx3P48381 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Rfx3P48381 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx3P48381 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rfx3P48381 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx3P48381 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.83□□□□□ -0.2
Rfx3P48381 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx3P48381 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rfx3P48381 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rfx3P48381 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms