Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 AC153366.2-201ENSMUST00000219461 1984 ntBASIC9.99□□□□□ -0.81
Xcl1P47993 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Xcl1P47993 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Kcnk16-202ENSMUST00000225596 2127 ntBASIC9.98□□□□□ -0.81
Xcl1P47993 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC9.98□□□□□ -0.81
Xcl1P47993 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Xcl1P47993 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Gm6576-201ENSMUST00000169678 883 ntBASIC9.98□□□□□ -0.81
Xcl1P47993 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 AC159205.3-201ENSMUST00000224614 874 ntBASIC9.98□□□□□ -0.81
Xcl1P47993 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Gm38197-201ENSMUST00000192320 2122 ntBASIC9.98□□□□□ -0.81
Xcl1P47993 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Xcl1P47993 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Xcl1P47993 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Xcl1P47993 Rubie-203ENSMUST00000227803 2430 ntBASIC9.97□□□□□ -0.81
Xcl1P47993 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC9.97□□□□□ -0.81
Xcl1P47993 Gm43509-201ENSMUST00000196551 2594 ntBASIC9.97□□□□□ -0.81
Xcl1P47993 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Xcl1P47993 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Xcl1P47993 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC9.97□□□□□ -0.81
Xcl1P47993 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC9.97□□□□□ -0.81
Xcl1P47993 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Xcl1P47993 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Xcl1P47993 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC9.97□□□□□ -0.81
Xcl1P47993 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Xcl1P47993 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
Xcl1P47993 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Xcl1P47993 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
Xcl1P47993 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Xcl1P47993 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC9.96□□□□□ -0.81
Xcl1P47993 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Xcl1P47993 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Xcl1P47993 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC9.96□□□□□ -0.81
Xcl1P47993 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Xcl1P47993 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Xcl1P47993 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Xcl1P47993 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Xcl1P47993 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Xcl1P47993 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC9.96□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms