Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nedd4P46935 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nedd4P46935 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.34■□□□□ 0.53
Nedd4P46935 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nedd4P46935 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nedd4P46935 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Nedd4P46935 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC18.34■□□□□ 0.53
Nedd4P46935 Gm18018-201ENSMUST00000198273 408 ntBASIC18.34■□□□□ 0.53
Nedd4P46935 Gm43630-201ENSMUST00000201550 776 ntBASIC18.34■□□□□ 0.53
Nedd4P46935 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.34■□□□□ 0.53
Nedd4P46935 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nedd4P46935 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nedd4P46935 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nedd4P46935 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nedd4P46935 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nedd4P46935 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nedd4P46935 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nedd4P46935 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nedd4P46935 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nedd4P46935 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nedd4P46935 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Nedd4P46935 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nedd4P46935 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nedd4P46935 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nedd4P46935 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nedd4P46935 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Nedd4P46935 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nedd4P46935 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Nedd4P46935 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.33■□□□□ 0.52
Nedd4P46935 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.33■□□□□ 0.52
Nedd4P46935 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nedd4P46935 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC18.33■□□□□ 0.52
Nedd4P46935 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nedd4P46935 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nedd4P46935 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nedd4P46935 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC18.33■□□□□ 0.52
Nedd4P46935 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nedd4P46935 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Nedd4P46935 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd4P46935 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Nedd4P46935 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd4P46935 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Nedd4P46935 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd4P46935 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd4P46935 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
Nedd4P46935 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nedd4P46935 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Nedd4P46935 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd4P46935 Gm12091-201ENSMUST00000146791 830 ntBASIC18.32■□□□□ 0.52
Nedd4P46935 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.32■□□□□ 0.52
Nedd4P46935 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Nedd4P46935 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd4P46935 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd4P46935 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd4P46935 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd4P46935 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd4P46935 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Nedd4P46935 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd4P46935 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd4P46935 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd4P46935 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd4P46935 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd4P46935 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Nedd4P46935 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.32■□□□□ 0.52
Nedd4P46935 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
Nedd4P46935 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nedd4P46935 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nedd4P46935 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nedd4P46935 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.31■□□□□ 0.52
Nedd4P46935 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Nedd4P46935 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nedd4P46935 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nedd4P46935 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nedd4P46935 Gm9115-201ENSMUST00000120192 1348 ntBASIC18.31■□□□□ 0.52
Nedd4P46935 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Nedd4P46935 Asic1-205ENSMUST00000228185 1818 ntBASIC18.31■□□□□ 0.52
Nedd4P46935 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Nedd4P46935 Gm14722-201ENSMUST00000118943 689 ntBASIC18.31■□□□□ 0.52
Nedd4P46935 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC18.31■□□□□ 0.52
Nedd4P46935 Gm14042-201ENSMUST00000120139 833 ntBASIC18.31■□□□□ 0.52
Nedd4P46935 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Nedd4P46935 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.31■□□□□ 0.52
Nedd4P46935 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Nedd4P46935 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.31■□□□□ 0.52
Nedd4P46935 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nedd4P46935 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nedd4P46935 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nedd4P46935 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nedd4P46935 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Nedd4P46935 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nedd4P46935 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nedd4P46935 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nedd4P46935 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Nedd4P46935 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nedd4P46935 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Nedd4P46935 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nedd4P46935 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nedd4P46935 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.3■□□□□ 0.52
Nedd4P46935 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Nedd4P46935 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms