Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Tnfsf4P43488 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.8□□□□□ -0.04
Tnfsf4P43488 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf4P43488 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.8□□□□□ -0.04
Tnfsf4P43488 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.8□□□□□ -0.04
Tnfsf4P43488 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf4P43488 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Tnfsf4P43488 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf4P43488 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.79□□□□□ -0.04
Tnfsf4P43488 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.79□□□□□ -0.04
Tnfsf4P43488 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.79□□□□□ -0.04
Tnfsf4P43488 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf4P43488 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Grk6-207ENSMUST00000225925 2769 ntBASIC14.79□□□□□ -0.04
Tnfsf4P43488 Efs-202ENSMUST00000227037 2540 ntBASIC14.79□□□□□ -0.04
Tnfsf4P43488 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Tnfsf4P43488 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf4P43488 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.78□□□□□ -0.04
Tnfsf4P43488 Gm15165-201ENSMUST00000118140 502 ntBASIC14.78□□□□□ -0.04
Tnfsf4P43488 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Gm25745-201ENSMUST00000174945 133 ntBASIC14.78□□□□□ -0.04
Tnfsf4P43488 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.78□□□□□ -0.04
Tnfsf4P43488 Gm18622-201ENSMUST00000219361 595 ntBASIC14.78□□□□□ -0.04
Tnfsf4P43488 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Tnfsf4P43488 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms