Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.98□□□□□ -0.33
Hist1h1dP43277 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Gm6345-202ENSMUST00000180900 204 ntBASIC12.98□□□□□ -0.33
Hist1h1dP43277 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC12.98□□□□□ -0.33
Hist1h1dP43277 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.98□□□□□ -0.33
Hist1h1dP43277 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h1dP43277 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.98□□□□□ -0.33
Hist1h1dP43277 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hist1h1dP43277 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.97□□□□□ -0.33
Hist1h1dP43277 Gm9172-201ENSMUST00000212092 954 ntBASIC12.97□□□□□ -0.33
Hist1h1dP43277 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Hist1h1dP43277 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Hist1h1dP43277 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h1dP43277 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h1dP43277 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h1dP43277 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h1dP43277 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Hist1h1dP43277 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h1dP43277 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.96□□□□□ -0.33
Hist1h1dP43277 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.96□□□□□ -0.33
Hist1h1dP43277 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.96□□□□□ -0.33
Hist1h1dP43277 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h1dP43277 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h1dP43277 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h1dP43277 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h1dP43277 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h1dP43277 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Hist1h1dP43277 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hist1h1dP43277 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hist1h1dP43277 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hist1h1dP43277 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hist1h1dP43277 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hist1h1dP43277 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Hist1h1dP43277 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Hist1h1dP43277 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hist1h1dP43277 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Hist1h1dP43277 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Hist1h1dP43277 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hist1h1dP43277 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hist1h1dP43277 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hist1h1dP43277 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hist1h1dP43277 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hist1h1dP43277 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hist1h1dP43277 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms