Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LdlrP35951 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LdlrP35951 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LdlrP35951 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LdlrP35951 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LdlrP35951 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LdlrP35951 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LdlrP35951 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LdlrP35951 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LdlrP35951 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LdlrP35951 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LdlrP35951 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LdlrP35951 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LdlrP35951 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LdlrP35951 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.23■□□□□ 0.03
LdlrP35951 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
LdlrP35951 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LdlrP35951 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.23■□□□□ 0.03
LdlrP35951 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.23■□□□□ 0.03
LdlrP35951 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.23■□□□□ 0.03
LdlrP35951 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.23■□□□□ 0.03
LdlrP35951 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LdlrP35951 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LdlrP35951 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LdlrP35951 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LdlrP35951 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.23■□□□□ 0.03
LdlrP35951 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LdlrP35951 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LdlrP35951 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LdlrP35951 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.23■□□□□ 0.03
LdlrP35951 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.23■□□□□ 0.03
LdlrP35951 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LdlrP35951 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LdlrP35951 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LdlrP35951 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LdlrP35951 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LdlrP35951 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LdlrP35951 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LdlrP35951 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LdlrP35951 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
LdlrP35951 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.22■□□□□ 0.03
LdlrP35951 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LdlrP35951 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.22■□□□□ 0.03
LdlrP35951 Gm18206-201ENSMUST00000207027 926 ntBASIC15.22■□□□□ 0.03
LdlrP35951 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.22■□□□□ 0.03
LdlrP35951 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.22■□□□□ 0.03
LdlrP35951 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.22■□□□□ 0.03
LdlrP35951 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
LdlrP35951 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LdlrP35951 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LdlrP35951 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LdlrP35951 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.21■□□□□ 0.03
LdlrP35951 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LdlrP35951 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LdlrP35951 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LdlrP35951 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
LdlrP35951 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LdlrP35951 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LdlrP35951 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LdlrP35951 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LdlrP35951 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LdlrP35951 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LdlrP35951 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.21■□□□□ 0.03
LdlrP35951 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LdlrP35951 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LdlrP35951 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LdlrP35951 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LdlrP35951 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LdlrP35951 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LdlrP35951 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LdlrP35951 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LdlrP35951 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LdlrP35951 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LdlrP35951 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms