Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc1P35601 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Rfc1P35601 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.19■□□□□ 0.18
Rfc1P35601 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc1P35601 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rfc1P35601 Gm45003-201ENSMUST00000205875 2158 ntBASIC16.19■□□□□ 0.18
Rfc1P35601 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Rfc1P35601 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc1P35601 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc1P35601 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc1P35601 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.18■□□□□ 0.18
Rfc1P35601 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc1P35601 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Rfc1P35601 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc1P35601 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc1P35601 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Rfc1P35601 Gm11336-201ENSMUST00000118168 334 ntBASIC16.18■□□□□ 0.18
Rfc1P35601 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc1P35601 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.18■□□□□ 0.18
Rfc1P35601 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc1P35601 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc1P35601 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Rfc1P35601 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.18■□□□□ 0.18
Rfc1P35601 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc1P35601 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc1P35601 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc1P35601 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.18■□□□□ 0.18
Rfc1P35601 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc1P35601 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.18■□□□□ 0.18
Rfc1P35601 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc1P35601 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.18■□□□□ 0.18
Rfc1P35601 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc1P35601 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc1P35601 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Rfc1P35601 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc1P35601 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.17■□□□□ 0.18
Rfc1P35601 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.17■□□□□ 0.18
Rfc1P35601 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.17■□□□□ 0.18
Rfc1P35601 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc1P35601 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc1P35601 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.17■□□□□ 0.18
Rfc1P35601 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rfc1P35601 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.17■□□□□ 0.18
Rfc1P35601 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Rfc1P35601 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc1P35601 Mir6982-201ENSMUST00000184354 68 ntBASIC16.17■□□□□ 0.18
Rfc1P35601 Gm45058-201ENSMUST00000205810 766 ntBASIC16.17■□□□□ 0.18
Rfc1P35601 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc1P35601 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc1P35601 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc1P35601 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc1P35601 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.17■□□□□ 0.18
Rfc1P35601 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC16.17■□□□□ 0.18
Rfc1P35601 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc1P35601 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc1P35601 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.17■□□□□ 0.18
Rfc1P35601 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc1P35601 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Rfc1P35601 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc1P35601 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc1P35601 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc1P35601 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Rfc1P35601 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc1P35601 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rfc1P35601 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc1P35601 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc1P35601 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Rfc1P35601 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc1P35601 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rfc1P35601 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc1P35601 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rfc1P35601 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.16■□□□□ 0.18
Rfc1P35601 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc1P35601 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rfc1P35601 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc1P35601 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.16■□□□□ 0.18
Rfc1P35601 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc1P35601 Mir5130-201ENSMUST00000175160 84 ntBASIC16.16■□□□□ 0.18
Rfc1P35601 Gm29707-201ENSMUST00000196325 491 ntBASIC16.16■□□□□ 0.18
Rfc1P35601 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc1P35601 Gm18959-201ENSMUST00000208954 655 ntBASIC16.16■□□□□ 0.18
Rfc1P35601 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc1P35601 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Rfc1P35601 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc1P35601 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc1P35601 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc1P35601 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rfc1P35601 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.16■□□□□ 0.18
Rfc1P35601 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc1P35601 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rfc1P35601 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rfc1P35601 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.16■□□□□ 0.18
Rfc1P35601 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfc1P35601 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfc1P35601 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Rfc1P35601 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Rfc1P35601 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfc1P35601 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rfc1P35601 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Rfc1P35601 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms