Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cd40lgP27548 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cd40lgP27548 Gm8344-201ENSMUST00000119813 856 ntBASIC14.13□□□□□ -0.15
Cd40lgP27548 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cd40lgP27548 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cd40lgP27548 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cd40lgP27548 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.13□□□□□ -0.15
Cd40lgP27548 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.13□□□□□ -0.15
Cd40lgP27548 Gm18622-201ENSMUST00000219361 595 ntBASIC14.13□□□□□ -0.15
Cd40lgP27548 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.13□□□□□ -0.15
Cd40lgP27548 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cd40lgP27548 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Cd40lgP27548 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Cd40lgP27548 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cd40lgP27548 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cd40lgP27548 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cd40lgP27548 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd40lgP27548 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd40lgP27548 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd40lgP27548 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd40lgP27548 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cd40lgP27548 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd40lgP27548 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd40lgP27548 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd40lgP27548 Gm13418-201ENSMUST00000119097 944 ntBASIC14.12□□□□□ -0.15
Cd40lgP27548 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cd40lgP27548 Gm44357-201ENSMUST00000195897 142 ntBASIC14.12□□□□□ -0.15
Cd40lgP27548 Gm19658-201ENSMUST00000196231 138 ntBASIC14.12□□□□□ -0.15
Cd40lgP27548 Gm44367-201ENSMUST00000196836 138 ntBASIC14.12□□□□□ -0.15
Cd40lgP27548 Gm44350-201ENSMUST00000197197 138 ntBASIC14.12□□□□□ -0.15
Cd40lgP27548 Gm44390-201ENSMUST00000197533 144 ntBASIC14.12□□□□□ -0.15
Cd40lgP27548 Gm44313-201ENSMUST00000198018 138 ntBASIC14.12□□□□□ -0.15
Cd40lgP27548 Gm44486-201ENSMUST00000198508 138 ntBASIC14.12□□□□□ -0.15
Cd40lgP27548 Gm44314-201ENSMUST00000199263 138 ntBASIC14.12□□□□□ -0.15
Cd40lgP27548 Gm44394-201ENSMUST00000199558 138 ntBASIC14.12□□□□□ -0.15
Cd40lgP27548 Gm44484-201ENSMUST00000199873 138 ntBASIC14.12□□□□□ -0.15
Cd40lgP27548 Gm44466-201ENSMUST00000200264 138 ntBASIC14.12□□□□□ -0.15
Cd40lgP27548 Gm44359-201ENSMUST00000200671 138 ntBASIC14.12□□□□□ -0.15
Cd40lgP27548 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd40lgP27548 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.12□□□□□ -0.15
Cd40lgP27548 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cd40lgP27548 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd40lgP27548 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cd40lgP27548 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.12□□□□□ -0.15
Cd40lgP27548 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd40lgP27548 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cd40lgP27548 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd40lgP27548 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cd40lgP27548 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd40lgP27548 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.12□□□□□ -0.15
Cd40lgP27548 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd40lgP27548 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cd40lgP27548 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd40lgP27548 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cd40lgP27548 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd40lgP27548 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd40lgP27548 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd40lgP27548 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.11□□□□□ -0.15
Cd40lgP27548 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd40lgP27548 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.11□□□□□ -0.15
Cd40lgP27548 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.11□□□□□ -0.15
Cd40lgP27548 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.11□□□□□ -0.15
Cd40lgP27548 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd40lgP27548 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cd40lgP27548 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cd40lgP27548 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd40lgP27548 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cd40lgP27548 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.11□□□□□ -0.15
Cd40lgP27548 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cd40lgP27548 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.11□□□□□ -0.15
Cd40lgP27548 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.11□□□□□ -0.15
Cd40lgP27548 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.11□□□□□ -0.15
Cd40lgP27548 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cd40lgP27548 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.11□□□□□ -0.15
Cd40lgP27548 Gm10060-201ENSMUST00000212002 111 ntBASIC14.11□□□□□ -0.15
Cd40lgP27548 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.11□□□□□ -0.15
Cd40lgP27548 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cd40lgP27548 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd40lgP27548 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd40lgP27548 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cd40lgP27548 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd40lgP27548 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Cd40lgP27548 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cd40lgP27548 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.11□□□□□ -0.15
Cd40lgP27548 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd40lgP27548 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd40lgP27548 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cd40lgP27548 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd40lgP27548 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd40lgP27548 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd40lgP27548 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd40lgP27548 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cd40lgP27548 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd40lgP27548 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd40lgP27548 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd40lgP27548 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd40lgP27548 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cd40lgP27548 Gm15173-201ENSMUST00000122049 433 ntBASIC14.1□□□□□ -0.15
Cd40lgP27548 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cd40lgP27548 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms