Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nfkb1P25799 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nfkb1P25799 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nfkb1P25799 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nfkb1P25799 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nfkb1P25799 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.73■□□□□ 0.11
Nfkb1P25799 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nfkb1P25799 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nfkb1P25799 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.73■□□□□ 0.11
Nfkb1P25799 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nfkb1P25799 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nfkb1P25799 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nfkb1P25799 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Nfkb1P25799 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Nfkb1P25799 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nfkb1P25799 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nfkb1P25799 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nfkb1P25799 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nfkb1P25799 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nfkb1P25799 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nfkb1P25799 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nfkb1P25799 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nfkb1P25799 Chchd1-203ENSMUST00000224633 557 ntBASIC15.72■□□□□ 0.11
Nfkb1P25799 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nfkb1P25799 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nfkb1P25799 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nfkb1P25799 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nfkb1P25799 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nfkb1P25799 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nfkb1P25799 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nfkb1P25799 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nfkb1P25799 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Nfkb1P25799 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nfkb1P25799 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nfkb1P25799 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nfkb1P25799 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Nfkb1P25799 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nfkb1P25799 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.71■□□□□ 0.11
Nfkb1P25799 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nfkb1P25799 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nfkb1P25799 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nfkb1P25799 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Nfkb1P25799 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nfkb1P25799 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nfkb1P25799 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nfkb1P25799 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nfkb1P25799 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nfkb1P25799 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nfkb1P25799 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nfkb1P25799 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Nfkb1P25799 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nfkb1P25799 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Nfkb1P25799 Gm10499-201ENSMUST00000174094 934 ntBASIC15.71■□□□□ 0.11
Nfkb1P25799 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Nfkb1P25799 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.71■□□□□ 0.11
Nfkb1P25799 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Nfkb1P25799 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nfkb1P25799 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nfkb1P25799 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nfkb1P25799 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Nfkb1P25799 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Nfkb1P25799 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Nfkb1P25799 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.71■□□□□ 0.1
Nfkb1P25799 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Nfkb1P25799 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nfkb1P25799 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Nfkb1P25799 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nfkb1P25799 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nfkb1P25799 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Nfkb1P25799 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nfkb1P25799 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Nfkb1P25799 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nfkb1P25799 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.7■□□□□ 0.1
Nfkb1P25799 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.7■□□□□ 0.1
Nfkb1P25799 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nfkb1P25799 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.7■□□□□ 0.1
Nfkb1P25799 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nfkb1P25799 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.7■□□□□ 0.1
Nfkb1P25799 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.7■□□□□ 0.1
Nfkb1P25799 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.7■□□□□ 0.1
Nfkb1P25799 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nfkb1P25799 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.7■□□□□ 0.1
Nfkb1P25799 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nfkb1P25799 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nfkb1P25799 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Nfkb1P25799 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nfkb1P25799 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Nfkb1P25799 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
Nfkb1P25799 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Nfkb1P25799 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nfkb1P25799 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nfkb1P25799 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nfkb1P25799 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nfkb1P25799 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.69■□□□□ 0.1
Nfkb1P25799 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.69■□□□□ 0.1
Nfkb1P25799 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nfkb1P25799 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nfkb1P25799 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Nfkb1P25799 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nfkb1P25799 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms