Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Pde6bP23440 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6bP23440 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pde6bP23440 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6bP23440 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6bP23440 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Pde6bP23440 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6bP23440 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6bP23440 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6bP23440 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pde6bP23440 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pde6bP23440 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pde6bP23440 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pde6bP23440 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pde6bP23440 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pde6bP23440 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pde6bP23440 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pde6bP23440 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pde6bP23440 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pde6bP23440 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.71■□□□□ 0.27
Pde6bP23440 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pde6bP23440 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Pde6bP23440 Gm14701-201ENSMUST00000117156 348 ntBASIC16.71■□□□□ 0.27
Pde6bP23440 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.71■□□□□ 0.27
Pde6bP23440 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pde6bP23440 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pde6bP23440 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pde6bP23440 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pde6bP23440 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.71■□□□□ 0.27
Pde6bP23440 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pde6bP23440 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pde6bP23440 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pde6bP23440 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pde6bP23440 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pde6bP23440 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pde6bP23440 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pde6bP23440 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6bP23440 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pde6bP23440 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6bP23440 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6bP23440 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6bP23440 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6bP23440 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.7■□□□□ 0.26
Pde6bP23440 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6bP23440 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6bP23440 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.7■□□□□ 0.26
Pde6bP23440 Gm17968-201ENSMUST00000194902 784 ntBASIC16.7■□□□□ 0.26
Pde6bP23440 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.7■□□□□ 0.26
Pde6bP23440 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.7■□□□□ 0.26
Pde6bP23440 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.7■□□□□ 0.26
Pde6bP23440 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.7■□□□□ 0.26
Pde6bP23440 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6bP23440 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6bP23440 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pde6bP23440 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Pde6bP23440 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6bP23440 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6bP23440 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6bP23440 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6bP23440 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Pde6bP23440 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pde6bP23440 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pde6bP23440 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pde6bP23440 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pde6bP23440 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pde6bP23440 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.69■□□□□ 0.26
Pde6bP23440 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.69■□□□□ 0.26
Pde6bP23440 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.69■□□□□ 0.26
Pde6bP23440 Gm13597-201ENSMUST00000121239 375 ntBASIC16.69■□□□□ 0.26
Pde6bP23440 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.69■□□□□ 0.26
Pde6bP23440 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pde6bP23440 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pde6bP23440 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pde6bP23440 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pde6bP23440 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pde6bP23440 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pde6bP23440 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
Pde6bP23440 Grk6-207ENSMUST00000225925 2769 ntBASIC16.69■□□□□ 0.26
Pde6bP23440 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pde6bP23440 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pde6bP23440 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pde6bP23440 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.69■□□□□ 0.26
Pde6bP23440 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pde6bP23440 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pde6bP23440 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.69■□□□□ 0.26
Pde6bP23440 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.68■□□□□ 0.26
Pde6bP23440 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pde6bP23440 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pde6bP23440 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pde6bP23440 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pde6bP23440 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
Pde6bP23440 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pde6bP23440 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pde6bP23440 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pde6bP23440 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pde6bP23440 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pde6bP23440 Mir1895-201ENSMUST00000122615 79 ntBASIC16.68■□□□□ 0.26
Pde6bP23440 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.68■□□□□ 0.26
Pde6bP23440 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pde6bP23440 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms