Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk1P22518 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Clk1P22518 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Clk1P22518 Gm28033-201ENSMUST00000184224 96 ntBASIC14.29□□□□□ -0.12
Clk1P22518 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.29□□□□□ -0.12
Clk1P22518 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.29□□□□□ -0.12
Clk1P22518 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Clk1P22518 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Clk1P22518 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk1P22518 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.29□□□□□ -0.12
Clk1P22518 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk1P22518 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clk1P22518 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Clk1P22518 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk1P22518 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk1P22518 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk1P22518 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Clk1P22518 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk1P22518 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clk1P22518 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk1P22518 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk1P22518 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk1P22518 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk1P22518 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Clk1P22518 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clk1P22518 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk1P22518 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.28□□□□□ -0.12
Clk1P22518 Gm12644-201ENSMUST00000119935 606 ntBASIC14.28□□□□□ -0.12
Clk1P22518 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.28□□□□□ -0.12
Clk1P22518 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.28□□□□□ -0.12
Clk1P22518 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk1P22518 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.28□□□□□ -0.12
Clk1P22518 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.28□□□□□ -0.12
Clk1P22518 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk1P22518 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.28□□□□□ -0.12
Clk1P22518 Gm8655-201ENSMUST00000221159 852 ntBASIC14.28□□□□□ -0.12
Clk1P22518 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.28□□□□□ -0.12
Clk1P22518 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Clk1P22518 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk1P22518 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk1P22518 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Clk1P22518 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk1P22518 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clk1P22518 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clk1P22518 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clk1P22518 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.27□□□□□ -0.12
Clk1P22518 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Clk1P22518 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk1P22518 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk1P22518 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Clk1P22518 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk1P22518 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk1P22518 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.27□□□□□ -0.12
Clk1P22518 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk1P22518 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk1P22518 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk1P22518 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Clk1P22518 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk1P22518 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Clk1P22518 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Clk1P22518 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Clk1P22518 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk1P22518 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk1P22518 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.27□□□□□ -0.13
Clk1P22518 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.27□□□□□ -0.13
Clk1P22518 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.27□□□□□ -0.13
Clk1P22518 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Clk1P22518 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk1P22518 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk1P22518 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Clk1P22518 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk1P22518 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Clk1P22518 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Clk1P22518 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Clk1P22518 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Clk1P22518 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.26□□□□□ -0.13
Clk1P22518 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Gm27867-201ENSMUST00000184778 125 ntBASIC14.26□□□□□ -0.13
Clk1P22518 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.26□□□□□ -0.13
Clk1P22518 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.26□□□□□ -0.13
Clk1P22518 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Clk1P22518 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Clk1P22518 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms