Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BdnfP21237 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.68□□□□□ -0.06
BdnfP21237 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
BdnfP21237 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.68□□□□□ -0.06
BdnfP21237 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
BdnfP21237 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BdnfP21237 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
BdnfP21237 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
BdnfP21237 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BdnfP21237 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
BdnfP21237 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
BdnfP21237 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BdnfP21237 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
BdnfP21237 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BdnfP21237 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BdnfP21237 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BdnfP21237 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
BdnfP21237 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
BdnfP21237 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BdnfP21237 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
BdnfP21237 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BdnfP21237 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
BdnfP21237 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
BdnfP21237 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
BdnfP21237 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
BdnfP21237 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BdnfP21237 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BdnfP21237 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BdnfP21237 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BdnfP21237 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BdnfP21237 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
BdnfP21237 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
BdnfP21237 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.67□□□□□ -0.06
BdnfP21237 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
BdnfP21237 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
BdnfP21237 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.67□□□□□ -0.06
BdnfP21237 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
BdnfP21237 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BdnfP21237 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
BdnfP21237 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
BdnfP21237 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.67□□□□□ -0.06
BdnfP21237 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.67□□□□□ -0.06
BdnfP21237 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BdnfP21237 Gm13312-201ENSMUST00000119631 718 ntBASIC14.67□□□□□ -0.06
BdnfP21237 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
BdnfP21237 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.67□□□□□ -0.06
BdnfP21237 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.67□□□□□ -0.06
BdnfP21237 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.67□□□□□ -0.06
BdnfP21237 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BdnfP21237 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
BdnfP21237 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BdnfP21237 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BdnfP21237 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BdnfP21237 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BdnfP21237 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.67□□□□□ -0.06
BdnfP21237 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BdnfP21237 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BdnfP21237 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.67□□□□□ -0.06
BdnfP21237 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BdnfP21237 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
BdnfP21237 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BdnfP21237 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
BdnfP21237 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
BdnfP21237 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
BdnfP21237 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.66□□□□□ -0.06
BdnfP21237 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
BdnfP21237 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
BdnfP21237 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
BdnfP21237 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
BdnfP21237 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.66□□□□□ -0.06
BdnfP21237 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
BdnfP21237 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Gm27742-201ENSMUST00000184667 60 ntBASIC14.66□□□□□ -0.06
BdnfP21237 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.66□□□□□ -0.06
BdnfP21237 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
BdnfP21237 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.66□□□□□ -0.06
BdnfP21237 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.66□□□□□ -0.06
BdnfP21237 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
BdnfP21237 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms