Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Gm8097-201ENSMUST00000117903 829 ntBASIC14.44□□□□□ -0.1
TP20293 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.44□□□□□ -0.1
TP20293 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.44□□□□□ -0.1
TP20293 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TP20293 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.44□□□□□ -0.1
TP20293 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TP20293 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TP20293 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TP20293 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TP20293 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TP20293 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TP20293 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TP20293 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.43□□□□□ -0.1
TP20293 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.43□□□□□ -0.1
TP20293 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TP20293 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.43□□□□□ -0.1
TP20293 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.43□□□□□ -0.1
TP20293 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.43□□□□□ -0.1
TP20293 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.43□□□□□ -0.1
TP20293 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
TP20293 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.43□□□□□ -0.1
TP20293 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TP20293 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
TP20293 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TP20293 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TP20293 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TP20293 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
TP20293 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TP20293 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TP20293 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TP20293 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TP20293 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TP20293 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TP20293 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TP20293 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TP20293 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TP20293 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TP20293 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TP20293 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TP20293 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TP20293 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TP20293 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TP20293 Gm44357-201ENSMUST00000195897 142 ntBASIC14.42□□□□□ -0.1
TP20293 Gm19658-201ENSMUST00000196231 138 ntBASIC14.42□□□□□ -0.1
TP20293 Gm44367-201ENSMUST00000196836 138 ntBASIC14.42□□□□□ -0.1
TP20293 Gm44350-201ENSMUST00000197197 138 ntBASIC14.42□□□□□ -0.1
TP20293 Gm44390-201ENSMUST00000197533 144 ntBASIC14.42□□□□□ -0.1
TP20293 Gm44313-201ENSMUST00000198018 138 ntBASIC14.42□□□□□ -0.1
TP20293 Gm44486-201ENSMUST00000198508 138 ntBASIC14.42□□□□□ -0.1
TP20293 Gm44314-201ENSMUST00000199263 138 ntBASIC14.42□□□□□ -0.1
TP20293 Gm44394-201ENSMUST00000199558 138 ntBASIC14.42□□□□□ -0.1
TP20293 Gm44484-201ENSMUST00000199873 138 ntBASIC14.42□□□□□ -0.1
TP20293 Gm44466-201ENSMUST00000200264 138 ntBASIC14.42□□□□□ -0.1
TP20293 Gm44359-201ENSMUST00000200671 138 ntBASIC14.42□□□□□ -0.1
TP20293 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TP20293 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TP20293 Rps4l-201ENSMUST00000071745 943 ntBASIC14.42□□□□□ -0.1
TP20293 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
TP20293 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TP20293 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TP20293 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TP20293 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TP20293 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TP20293 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TP20293 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TP20293 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TP20293 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TP20293 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TP20293 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TP20293 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TP20293 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TP20293 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
TP20293 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TP20293 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms