Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kcna1P16388 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kcna1P16388 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kcna1P16388 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kcna1P16388 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kcna1P16388 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Kcna1P16388 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Kcna1P16388 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.34■□□□□ 0.37
Kcna1P16388 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Kcna1P16388 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.34■□□□□ 0.37
Kcna1P16388 Mir3113-201ENSMUST00000175478 76 ntBASIC17.34■□□□□ 0.37
Kcna1P16388 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.34■□□□□ 0.37
Kcna1P16388 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.34■□□□□ 0.37
Kcna1P16388 Gm5177-201ENSMUST00000183092 997 ntBASIC17.34■□□□□ 0.37
Kcna1P16388 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.34■□□□□ 0.37
Kcna1P16388 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.34■□□□□ 0.37
Kcna1P16388 Gm45747-201ENSMUST00000212203 999 ntBASIC17.34■□□□□ 0.37
Kcna1P16388 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.34■□□□□ 0.37
Kcna1P16388 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.34■□□□□ 0.37
Kcna1P16388 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Kcna1P16388 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Kcna1P16388 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Kcna1P16388 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Kcna1P16388 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Kcna1P16388 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.33■□□□□ 0.37
Kcna1P16388 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Kcna1P16388 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Kcna1P16388 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Kcna1P16388 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Kcna1P16388 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Kcna1P16388 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Kcna1P16388 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Kcna1P16388 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Kcna1P16388 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Kcna1P16388 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Kcna1P16388 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Kcna1P16388 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Kcna1P16388 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Kcna1P16388 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Kcna1P16388 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Kcna1P16388 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.33■□□□□ 0.36
Kcna1P16388 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.33■□□□□ 0.36
Kcna1P16388 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Kcna1P16388 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Kcna1P16388 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.33■□□□□ 0.36
Kcna1P16388 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Kcna1P16388 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Kcna1P16388 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Kcna1P16388 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Kcna1P16388 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Kcna1P16388 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Kcna1P16388 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcna1P16388 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Kcna1P16388 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.32■□□□□ 0.36
Kcna1P16388 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Kcna1P16388 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Kcna1P16388 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcna1P16388 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcna1P16388 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Kcna1P16388 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.32■□□□□ 0.36
Kcna1P16388 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.32■□□□□ 0.36
Kcna1P16388 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.32■□□□□ 0.36
Kcna1P16388 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Kcna1P16388 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.32■□□□□ 0.36
Kcna1P16388 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcna1P16388 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Kcna1P16388 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcna1P16388 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcna1P16388 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcna1P16388 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcna1P16388 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcna1P16388 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Kcna1P16388 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcna1P16388 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Kcna1P16388 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcna1P16388 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Kcna1P16388 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Kcna1P16388 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Kcna1P16388 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms