Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.68■□□□□ 0.42
Usp53P15975 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Usp53P15975 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.68■□□□□ 0.42
Usp53P15975 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Usp53P15975 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Usp53P15975 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.68■□□□□ 0.42
Usp53P15975 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp53P15975 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp53P15975 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp53P15975 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp53P15975 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Usp53P15975 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp53P15975 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Usp53P15975 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp53P15975 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.68■□□□□ 0.42
Usp53P15975 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Usp53P15975 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Usp53P15975 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp53P15975 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp53P15975 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp53P15975 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp53P15975 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp53P15975 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp53P15975 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp53P15975 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp53P15975 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp53P15975 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp53P15975 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp53P15975 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp53P15975 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC17.67■□□□□ 0.42
Usp53P15975 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp53P15975 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp53P15975 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp53P15975 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Usp53P15975 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp53P15975 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Usp53P15975 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp53P15975 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp53P15975 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Usp53P15975 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Usp53P15975 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.67■□□□□ 0.42
Usp53P15975 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp53P15975 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Usp53P15975 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp53P15975 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp53P15975 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp53P15975 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Usp53P15975 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Usp53P15975 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp53P15975 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp53P15975 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Usp53P15975 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp53P15975 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp53P15975 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.66■□□□□ 0.42
Usp53P15975 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.66■□□□□ 0.42
Usp53P15975 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp53P15975 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp53P15975 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp53P15975 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp53P15975 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp53P15975 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp53P15975 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Usp53P15975 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp53P15975 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp53P15975 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp53P15975 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp53P15975 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp53P15975 Gm15427-201ENSMUST00000117288 531 ntBASIC17.65■□□□□ 0.42
Usp53P15975 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.65■□□□□ 0.42
Usp53P15975 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.65■□□□□ 0.42
Usp53P15975 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC17.65■□□□□ 0.42
Usp53P15975 Gm27301-201ENSMUST00000184012 127 ntBASIC17.65■□□□□ 0.42
Usp53P15975 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp53P15975 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.65■□□□□ 0.42
Usp53P15975 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp53P15975 Gm20553-201ENSMUST00000204205 844 ntBASIC17.65■□□□□ 0.42
Usp53P15975 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp53P15975 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.65■□□□□ 0.42
Usp53P15975 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp53P15975 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp53P15975 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Usp53P15975 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.65■□□□□ 0.42
Usp53P15975 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp53P15975 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Usp53P15975 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Usp53P15975 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Usp53P15975 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Usp53P15975 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.64■□□□□ 0.42
Usp53P15975 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Usp53P15975 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp53P15975 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.64■□□□□ 0.41
Usp53P15975 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Usp53P15975 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Usp53P15975 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Usp53P15975 Chchd1-203ENSMUST00000224633 557 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms