Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.52□□□□□ -0.09
Msx1P13297 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.52□□□□□ -0.09
Msx1P13297 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.52□□□□□ -0.09
Msx1P13297 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.52□□□□□ -0.09
Msx1P13297 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.52□□□□□ -0.09
Msx1P13297 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.52□□□□□ -0.09
Msx1P13297 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.52□□□□□ -0.09
Msx1P13297 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.52□□□□□ -0.09
Msx1P13297 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.52□□□□□ -0.09
Msx1P13297 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.52□□□□□ -0.09
Msx1P13297 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.52□□□□□ -0.09
Msx1P13297 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.52□□□□□ -0.09
Msx1P13297 Gm8825-201ENSMUST00000182565 998 ntBASIC14.52□□□□□ -0.09
Msx1P13297 Gm4518-201ENSMUST00000182638 718 ntBASIC14.52□□□□□ -0.09
Msx1P13297 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.52□□□□□ -0.09
Msx1P13297 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.52□□□□□ -0.09
Msx1P13297 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.52□□□□□ -0.09
Msx1P13297 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.52□□□□□ -0.09
Msx1P13297 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.52□□□□□ -0.09
Msx1P13297 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.52□□□□□ -0.09
Msx1P13297 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.52□□□□□ -0.09
Msx1P13297 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Msx1P13297 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msx1P13297 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msx1P13297 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.52□□□□□ -0.09
Msx1P13297 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msx1P13297 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.52□□□□□ -0.09
Msx1P13297 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msx1P13297 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msx1P13297 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.52□□□□□ -0.09
Msx1P13297 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Msx1P13297 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Msx1P13297 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Msx1P13297 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Msx1P13297 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msx1P13297 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msx1P13297 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msx1P13297 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Msx1P13297 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msx1P13297 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msx1P13297 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Msx1P13297 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msx1P13297 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Msx1P13297 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msx1P13297 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.51□□□□□ -0.09
Msx1P13297 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.51□□□□□ -0.09
Msx1P13297 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.51□□□□□ -0.09
Msx1P13297 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Msx1P13297 Gm17271-201ENSMUST00000165535 355 ntBASIC14.51□□□□□ -0.09
Msx1P13297 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msx1P13297 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.51□□□□□ -0.09
Msx1P13297 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.51□□□□□ -0.09
Msx1P13297 CT009764.1-201ENSMUST00000222260 483 ntBASIC14.51□□□□□ -0.09
Msx1P13297 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msx1P13297 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msx1P13297 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msx1P13297 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msx1P13297 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Msx1P13297 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Msx1P13297 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.51□□□□□ -0.09
Msx1P13297 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msx1P13297 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msx1P13297 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msx1P13297 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msx1P13297 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Msx1P13297 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Msx1P13297 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msx1P13297 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Msx1P13297 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Msx1P13297 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msx1P13297 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msx1P13297 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msx1P13297 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msx1P13297 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msx1P13297 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msx1P13297 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Msx1P13297 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msx1P13297 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC14.5□□□□□ -0.09
Msx1P13297 Gm27646-201ENSMUST00000183989 110 ntBASIC14.5□□□□□ -0.09
Msx1P13297 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.5□□□□□ -0.09
Msx1P13297 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msx1P13297 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.5□□□□□ -0.09
Msx1P13297 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.5□□□□□ -0.09
Msx1P13297 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.5□□□□□ -0.09
Msx1P13297 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msx1P13297 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Msx1P13297 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msx1P13297 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msx1P13297 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msx1P13297 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msx1P13297 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Msx1P13297 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msx1P13297 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msx1P13297 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msx1P13297 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msx1P13297 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Msx1P13297 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Msx1P13297 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.49□□□□□ -0.09
Msx1P13297 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Msx1P13297 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms