Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cntn1P12960 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cntn1P12960 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cntn1P12960 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cntn1P12960 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cntn1P12960 Mir3113-201ENSMUST00000175478 76 ntBASIC14.69□□□□□ -0.06
Cntn1P12960 Gm8318-201ENSMUST00000182954 872 ntBASIC14.69□□□□□ -0.06
Cntn1P12960 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.69□□□□□ -0.06
Cntn1P12960 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Cntn1P12960 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cntn1P12960 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.69□□□□□ -0.06
Cntn1P12960 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cntn1P12960 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cntn1P12960 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cntn1P12960 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cntn1P12960 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cntn1P12960 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cntn1P12960 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cntn1P12960 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cntn1P12960 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cntn1P12960 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cntn1P12960 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cntn1P12960 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cntn1P12960 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cntn1P12960 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cntn1P12960 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cntn1P12960 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cntn1P12960 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cntn1P12960 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cntn1P12960 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.68□□□□□ -0.06
Cntn1P12960 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cntn1P12960 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.68□□□□□ -0.06
Cntn1P12960 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.68□□□□□ -0.06
Cntn1P12960 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cntn1P12960 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cntn1P12960 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cntn1P12960 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.68□□□□□ -0.06
Cntn1P12960 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Cntn1P12960 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cntn1P12960 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cntn1P12960 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cntn1P12960 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cntn1P12960 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cntn1P12960 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cntn1P12960 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cntn1P12960 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cntn1P12960 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cntn1P12960 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cntn1P12960 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cntn1P12960 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cntn1P12960 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cntn1P12960 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cntn1P12960 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cntn1P12960 Gm14722-201ENSMUST00000118943 689 ntBASIC14.67□□□□□ -0.06
Cntn1P12960 Gm13597-201ENSMUST00000121239 375 ntBASIC14.67□□□□□ -0.06
Cntn1P12960 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.67□□□□□ -0.06
Cntn1P12960 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cntn1P12960 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.67□□□□□ -0.06
Cntn1P12960 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.67□□□□□ -0.06
Cntn1P12960 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cntn1P12960 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cntn1P12960 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cntn1P12960 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cntn1P12960 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cntn1P12960 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cntn1P12960 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.67□□□□□ -0.06
Cntn1P12960 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cntn1P12960 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cntn1P12960 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cntn1P12960 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cntn1P12960 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.66□□□□□ -0.06
Cntn1P12960 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cntn1P12960 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cntn1P12960 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cntn1P12960 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.66□□□□□ -0.06
Cntn1P12960 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cntn1P12960 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cntn1P12960 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cntn1P12960 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cntn1P12960 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.66□□□□□ -0.06
Cntn1P12960 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.66□□□□□ -0.06
Cntn1P12960 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cntn1P12960 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cntn1P12960 Gm10175-201ENSMUST00000086013 645 ntBASIC14.66□□□□□ -0.06
Cntn1P12960 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.66□□□□□ -0.06
Cntn1P12960 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cntn1P12960 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cntn1P12960 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cntn1P12960 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cntn1P12960 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cntn1P12960 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cntn1P12960 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cntn1P12960 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cntn1P12960 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.66□□□□□ -0.06
Cntn1P12960 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.66□□□□□ -0.06
Cntn1P12960 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.66□□□□□ -0.06
Cntn1P12960 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cntn1P12960 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Cntn1P12960 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cntn1P12960 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 124.7 ms