Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.48□□□□□ -0.25
Ccl3P10855 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccl3P10855 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.48□□□□□ -0.25
Ccl3P10855 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccl3P10855 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccl3P10855 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccl3P10855 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccl3P10855 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Ccl3P10855 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccl3P10855 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccl3P10855 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccl3P10855 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccl3P10855 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccl3P10855 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccl3P10855 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccl3P10855 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccl3P10855 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.47□□□□□ -0.25
Ccl3P10855 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccl3P10855 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccl3P10855 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ccl3P10855 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ccl3P10855 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.47□□□□□ -0.25
Ccl3P10855 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.47□□□□□ -0.25
Ccl3P10855 Gm15483-201ENSMUST00000120338 456 ntBASIC13.47□□□□□ -0.25
Ccl3P10855 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccl3P10855 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccl3P10855 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.47□□□□□ -0.25
Ccl3P10855 Gm23547-201ENSMUST00000158210 271 ntBASIC13.47□□□□□ -0.25
Ccl3P10855 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Gm38294-201ENSMUST00000192831 381 ntBASIC13.47□□□□□ -0.25
Ccl3P10855 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.47□□□□□ -0.25
Ccl3P10855 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Ccl3P10855 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.47□□□□□ -0.25
Ccl3P10855 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccl3P10855 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccl3P10855 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccl3P10855 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccl3P10855 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccl3P10855 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccl3P10855 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccl3P10855 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccl3P10855 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccl3P10855 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.46□□□□□ -0.25
Ccl3P10855 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccl3P10855 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ccl3P10855 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.46□□□□□ -0.25
Ccl3P10855 Gm8410-201ENSMUST00000117225 605 ntBASIC13.46□□□□□ -0.25
Ccl3P10855 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ccl3P10855 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccl3P10855 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccl3P10855 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.46□□□□□ -0.25
Ccl3P10855 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ccl3P10855 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccl3P10855 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Ccl3P10855 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccl3P10855 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.46□□□□□ -0.26
Ccl3P10855 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.46□□□□□ -0.26
Ccl3P10855 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccl3P10855 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccl3P10855 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ccl3P10855 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ccl3P10855 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.45□□□□□ -0.26
Ccl3P10855 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ccl3P10855 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Ccl3P10855 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.45□□□□□ -0.26
Ccl3P10855 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.45□□□□□ -0.26
Ccl3P10855 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC13.45□□□□□ -0.26
Ccl3P10855 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ccl3P10855 Gm5866-201ENSMUST00000177881 973 ntBASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms