Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ly6c1P0CW02 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Gm11779-201ENSMUST00000118541 368 ntBASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ly6c1P0CW02 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.78□□□□□ -0.36
Ly6c1P0CW02 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Ly6c1P0CW02 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ly6c1P0CW02 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ly6c1P0CW02 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ly6c1P0CW02 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ly6c1P0CW02 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ly6c1P0CW02 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ly6c1P0CW02 Gm13597-201ENSMUST00000121239 375 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms