Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.34□□□□□ -0.27
UbbP0CG49 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UbbP0CG49 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UbbP0CG49 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
UbbP0CG49 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UbbP0CG49 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.34□□□□□ -0.27
UbbP0CG49 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UbbP0CG49 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UbbP0CG49 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UbbP0CG49 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.34□□□□□ -0.27
UbbP0CG49 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
UbbP0CG49 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UbbP0CG49 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UbbP0CG49 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
UbbP0CG49 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
UbbP0CG49 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
UbbP0CG49 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
UbbP0CG49 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
UbbP0CG49 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
UbbP0CG49 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
UbbP0CG49 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
UbbP0CG49 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.33□□□□□ -0.28
UbbP0CG49 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
UbbP0CG49 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Gm10013-201ENSMUST00000106074 672 ntBASIC13.33□□□□□ -0.28
UbbP0CG49 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.33□□□□□ -0.28
UbbP0CG49 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
UbbP0CG49 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Gm25406-201ENSMUST00000157599 105 ntBASIC13.33□□□□□ -0.28
UbbP0CG49 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.33□□□□□ -0.28
UbbP0CG49 Gm6623-201ENSMUST00000173570 544 ntBASIC13.33□□□□□ -0.28
UbbP0CG49 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.33□□□□□ -0.28
UbbP0CG49 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.33□□□□□ -0.28
UbbP0CG49 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
UbbP0CG49 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
UbbP0CG49 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
UbbP0CG49 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
UbbP0CG49 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.33□□□□□ -0.28
UbbP0CG49 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
UbbP0CG49 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UbbP0CG49 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UbbP0CG49 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UbbP0CG49 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
UbbP0CG49 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
UbbP0CG49 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UbbP0CG49 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
UbbP0CG49 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.32□□□□□ -0.28
UbbP0CG49 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.32□□□□□ -0.28
UbbP0CG49 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UbbP0CG49 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UbbP0CG49 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
UbbP0CG49 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UbbP0CG49 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UbbP0CG49 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UbbP0CG49 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UbbP0CG49 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UbbP0CG49 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
UbbP0CG49 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
UbbP0CG49 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
UbbP0CG49 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
UbbP0CG49 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UbbP0CG49 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UbbP0CG49 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
UbbP0CG49 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
UbbP0CG49 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.32□□□□□ -0.28
UbbP0CG49 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UbbP0CG49 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
UbbP0CG49 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UbbP0CG49 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
UbbP0CG49 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.31□□□□□ -0.28
UbbP0CG49 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
UbbP0CG49 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
UbbP0CG49 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
UbbP0CG49 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms