Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Gm24694-201ENSMUST00000180054 110 ntBASIC14.09□□□□□ -0.15
Col4a2P08122 Gm27663-201ENSMUST00000184839 110 ntBASIC14.09□□□□□ -0.15
Col4a2P08122 Gm6888-201ENSMUST00000221983 706 ntBASIC14.09□□□□□ -0.15
Col4a2P08122 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a2P08122 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a2P08122 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a2P08122 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a2P08122 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col4a2P08122 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.09□□□□□ -0.15
Col4a2P08122 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.08□□□□□ -0.15
Col4a2P08122 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a2P08122 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Col4a2P08122 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a2P08122 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a2P08122 Gm8410-201ENSMUST00000117225 605 ntBASIC14.08□□□□□ -0.16
Col4a2P08122 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a2P08122 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col4a2P08122 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.08□□□□□ -0.16
Col4a2P08122 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a2P08122 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a2P08122 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a2P08122 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col4a2P08122 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a2P08122 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.08□□□□□ -0.16
Col4a2P08122 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a2P08122 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a2P08122 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a2P08122 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a2P08122 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col4a2P08122 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a2P08122 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a2P08122 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a2P08122 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.07□□□□□ -0.16
Col4a2P08122 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.07□□□□□ -0.16
Col4a2P08122 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.07□□□□□ -0.16
Col4a2P08122 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.07□□□□□ -0.16
Col4a2P08122 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a2P08122 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a2P08122 Gm38225-201ENSMUST00000194001 393 ntBASIC14.07□□□□□ -0.16
Col4a2P08122 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Col4a2P08122 Gm18049-201ENSMUST00000208909 581 ntBASIC14.07□□□□□ -0.16
Col4a2P08122 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.07□□□□□ -0.16
Col4a2P08122 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Col4a2P08122 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a2P08122 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a2P08122 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a2P08122 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a2P08122 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a2P08122 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.07□□□□□ -0.16
Col4a2P08122 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col4a2P08122 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a2P08122 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a2P08122 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.07□□□□□ -0.16
Col4a2P08122 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a2P08122 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a2P08122 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a2P08122 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a2P08122 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a2P08122 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.07□□□□□ -0.16
Col4a2P08122 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.07□□□□□ -0.16
Col4a2P08122 Gm15483-201ENSMUST00000120338 456 ntBASIC14.07□□□□□ -0.16
Col4a2P08122 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col4a2P08122 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.07□□□□□ -0.16
Col4a2P08122 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.07□□□□□ -0.16
Col4a2P08122 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Col4a2P08122 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a2P08122 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a2P08122 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Col4a2P08122 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Col4a2P08122 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a2P08122 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Col4a2P08122 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Col4a2P08122 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.06□□□□□ -0.16
Col4a2P08122 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.06□□□□□ -0.16
Col4a2P08122 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a2P08122 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a2P08122 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a2P08122 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a2P08122 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Col4a2P08122 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Col4a2P08122 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a2P08122 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a2P08122 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a2P08122 Gm27533-201ENSMUST00000183800 152 ntBASIC14.06□□□□□ -0.16
Col4a2P08122 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a2P08122 Gm9063-201ENSMUST00000223299 582 ntBASIC14.06□□□□□ -0.16
Col4a2P08122 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a2P08122 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a2P08122 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a2P08122 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a2P08122 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Col4a2P08122 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Col4a2P08122 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a2P08122 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a2P08122 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a2P08122 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a2P08122 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a2P08122 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Col4a2P08122 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col4a2P08122 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms