Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm12260-201ENSMUST00000122447 411 ntBASIC15.03■□□□□ -0
Hoxa4P06798 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC15.03■□□□□ -0
Hoxa4P06798 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.03■□□□□ -0
Hoxa4P06798 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hoxa4P06798 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.03■□□□□ -0
Hoxa4P06798 Gm5264-201ENSMUST00000190584 848 ntBASIC15.03■□□□□ -0
Hoxa4P06798 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.03■□□□□ -0
Hoxa4P06798 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.03■□□□□ -0
Hoxa4P06798 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.03■□□□□ -0
Hoxa4P06798 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxa4P06798 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxa4P06798 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.03■□□□□ -0
Hoxa4P06798 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.03■□□□□ -0
Hoxa4P06798 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxa4P06798 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxa4P06798 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxa4P06798 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.03■□□□□ -0
Hoxa4P06798 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Hoxa4P06798 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Hoxa4P06798 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Hoxa4P06798 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Hoxa4P06798 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.02■□□□□ -0
Hoxa4P06798 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hoxa4P06798 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.02■□□□□ -0
Hoxa4P06798 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.02■□□□□ -0
Hoxa4P06798 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Hoxa4P06798 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hoxa4P06798 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.02■□□□□ -0
Hoxa4P06798 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hoxa4P06798 Gm14494-201ENSMUST00000118786 435 ntBASIC15.02■□□□□ -0
Hoxa4P06798 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.02■□□□□ -0
Hoxa4P06798 Gm5177-201ENSMUST00000183092 997 ntBASIC15.02■□□□□ -0
Hoxa4P06798 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.02■□□□□ -0
Hoxa4P06798 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.02■□□□□ -0
Hoxa4P06798 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.02■□□□□ -0
Hoxa4P06798 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.02■□□□□ -0
Hoxa4P06798 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.02■□□□□ -0
Hoxa4P06798 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.02■□□□□ -0
Hoxa4P06798 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Hoxa4P06798 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Hoxa4P06798 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxa4P06798 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxa4P06798 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Hoxa4P06798 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxa4P06798 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxa4P06798 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Hoxa4P06798 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa4P06798 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Hoxa4P06798 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa4P06798 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa4P06798 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa4P06798 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa4P06798 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa4P06798 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa4P06798 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa4P06798 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.01□□□□□ -0.01
Hoxa4P06798 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.01□□□□□ -0.01
Hoxa4P06798 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa4P06798 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.01□□□□□ -0.01
Hoxa4P06798 Mir3113-201ENSMUST00000175478 76 ntBASIC15.01□□□□□ -0.01
Hoxa4P06798 Gm43767-201ENSMUST00000198933 381 ntBASIC15.01□□□□□ -0.01
Hoxa4P06798 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.01□□□□□ -0.01
Hoxa4P06798 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Hoxa4P06798 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa4P06798 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa4P06798 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.01□□□□□ -0.01
Hoxa4P06798 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa4P06798 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa4P06798 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa4P06798 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.01□□□□□ -0.01
Hoxa4P06798 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa4P06798 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa4P06798 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Hoxa4P06798 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa4P06798 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa4P06798 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxa4P06798 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hoxa4P06798 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15□□□□□ -0.01
Hoxa4P06798 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa4P06798 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa4P06798 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa4P06798 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa4P06798 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hoxa4P06798 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa4P06798 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa4P06798 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa4P06798 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa4P06798 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa4P06798 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa4P06798 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa4P06798 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15□□□□□ -0.01
Hoxa4P06798 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC15□□□□□ -0.01
Hoxa4P06798 Gm43332-201ENSMUST00000202511 1044 ntBASIC15□□□□□ -0.01
Hoxa4P06798 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15□□□□□ -0.01
Hoxa4P06798 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa4P06798 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa4P06798 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa4P06798 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa4P06798 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxa4P06798 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms