Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
P03980 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
P03980 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
P03980 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P03980 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P03980 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P03980 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
P03980 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P03980 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
P03980 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P03980 Gm12134-201ENSMUST00000122109 520 ntBASIC11.85□□□□□ -0.51
P03980 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC11.85□□□□□ -0.51
P03980 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
P03980 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P03980 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.85□□□□□ -0.51
P03980 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.85□□□□□ -0.51
P03980 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
P03980 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
P03980 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P03980 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
P03980 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P03980 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P03980 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
P03980 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC11.85□□□□□ -0.51
P03980 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P03980 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P03980 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P03980 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P03980 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.84□□□□□ -0.51
P03980 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P03980 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P03980 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
P03980 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC11.84□□□□□ -0.51
P03980 Gm18101-201ENSMUST00000215769 548 ntBASIC11.84□□□□□ -0.51
P03980 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
P03980 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
P03980 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P03980 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P03980 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P03980 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.84□□□□□ -0.51
P03980 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
P03980 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
P03980 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
P03980 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.84□□□□□ -0.51
P03980 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
P03980 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
P03980 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.83□□□□□ -0.52
P03980 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
P03980 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.83□□□□□ -0.52
P03980 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.83□□□□□ -0.52
P03980 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
P03980 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Krtap5-1-202ENSMUST00000188274 742 ntBASIC11.83□□□□□ -0.52
P03980 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.83□□□□□ -0.52
P03980 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
P03980 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
P03980 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Gm8668-201ENSMUST00000120559 1447 ntBASIC11.83□□□□□ -0.52
P03980 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
P03980 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
P03980 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
P03980 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P03980 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.82□□□□□ -0.52
P03980 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P03980 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P03980 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
P03980 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
P03980 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P03980 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
P03980 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P03980 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.82□□□□□ -0.52
P03980 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.82□□□□□ -0.52
P03980 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P03980 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P03980 Gm25406-201ENSMUST00000157599 105 ntBASIC11.82□□□□□ -0.52
P03980 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC11.82□□□□□ -0.52
P03980 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC11.82□□□□□ -0.52
P03980 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P03980 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P03980 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms