Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Col4a1P02463 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a1P02463 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a1P02463 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.62■□□□□ 0.57
Col4a1P02463 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a1P02463 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a1P02463 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.62■□□□□ 0.57
Col4a1P02463 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Col4a1P02463 Gm5479-201ENSMUST00000160578 435 ntBASIC18.62■□□□□ 0.57
Col4a1P02463 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Col4a1P02463 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a1P02463 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Col4a1P02463 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a1P02463 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Col4a1P02463 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a1P02463 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a1P02463 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Col4a1P02463 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a1P02463 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a1P02463 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Col4a1P02463 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.61■□□□□ 0.57
Col4a1P02463 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a1P02463 Gm7730-201ENSMUST00000212486 454 ntBASIC18.61■□□□□ 0.57
Col4a1P02463 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a1P02463 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a1P02463 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a1P02463 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a1P02463 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a1P02463 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Col4a1P02463 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Col4a1P02463 Gm6263-201ENSMUST00000120029 1342 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a1P02463 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.6■□□□□ 0.57
Col4a1P02463 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a1P02463 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a1P02463 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a1P02463 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a1P02463 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a1P02463 Gm16215-201ENSMUST00000161990 637 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm9719-201ENSMUST00000162765 543 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Col4a1P02463 Mir8102-201ENSMUST00000184148 139 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm29310-201ENSMUST00000185468 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm21825-201ENSMUST00000185728 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm29109-201ENSMUST00000185895 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm21896-201ENSMUST00000186520 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm21873-201ENSMUST00000186728 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm21794-201ENSMUST00000187056 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm21880-201ENSMUST00000187275 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm21826-201ENSMUST00000187451 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm21198-201ENSMUST00000188393 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm21749-201ENSMUST00000189343 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm21901-201ENSMUST00000189568 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm29424-201ENSMUST00000189716 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm28599-201ENSMUST00000189838 694 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm21867-201ENSMUST00000189917 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm29269-201ENSMUST00000190087 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm21722-201ENSMUST00000190153 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm28423-201ENSMUST00000190701 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm21899-201ENSMUST00000190745 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm21910-201ENSMUST00000191163 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm21849-201ENSMUST00000191571 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm28678-201ENSMUST00000191593 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm20910-201ENSMUST00000193268 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm21871-201ENSMUST00000194621 696 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Gm44344-201ENSMUST00000200287 129 ntBASIC18.6■□□□□ 0.57
Col4a1P02463 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC18.6■□□□□ 0.57
Col4a1P02463 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC18.6■□□□□ 0.57
Col4a1P02463 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a1P02463 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a1P02463 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a1P02463 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a1P02463 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a1P02463 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a1P02463 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.6■□□□□ 0.57
Col4a1P02463 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.6■□□□□ 0.57
Col4a1P02463 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Col4a1P02463 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col4a1P02463 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col4a1P02463 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col4a1P02463 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col4a1P02463 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Col4a1P02463 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col4a1P02463 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Col4a1P02463 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col4a1P02463 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Col4a1P02463 Gm6912-201ENSMUST00000117218 544 ntBASIC18.59■□□□□ 0.57
Col4a1P02463 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.59■□□□□ 0.57
Col4a1P02463 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Col4a1P02463 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col4a1P02463 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Col4a1P02463 Gm6756-201ENSMUST00000180647 1620 ntBASIC18.59■□□□□ 0.57
Col4a1P02463 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.58■□□□□ 0.57
Col4a1P02463 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col4a1P02463 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col4a1P02463 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Col4a1P02463 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col4a1P02463 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Col4a1P02463 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC18.58■□□□□ 0.57
Col4a1P02463 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms