Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.65■□□□□ 0.26
P01734 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
P01734 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
P01734 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01734 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
P01734 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
P01734 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
P01734 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
P01734 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01734 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
P01734 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01734 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01734 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01734 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
P01734 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01734 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
P01734 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01734 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.64■□□□□ 0.25
P01734 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
P01734 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.64■□□□□ 0.25
P01734 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01734 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
P01734 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.64■□□□□ 0.25
P01734 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01734 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01734 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01734 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.64■□□□□ 0.25
P01734 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.64■□□□□ 0.25
P01734 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01734 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01734 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01734 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01734 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01734 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
P01734 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01734 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.63■□□□□ 0.25
P01734 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01734 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
P01734 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01734 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01734 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
P01734 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01734 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01734 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01734 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01734 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01734 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
P01734 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.63■□□□□ 0.25
P01734 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01734 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01734 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01734 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01734 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01734 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
P01734 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
P01734 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01734 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01734 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
P01734 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.62■□□□□ 0.25
P01734 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01734 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.62■□□□□ 0.25
P01734 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
P01734 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01734 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.62■□□□□ 0.25
P01734 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.62■□□□□ 0.25
P01734 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01734 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
P01734 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
P01734 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01734 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01734 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01734 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.62■□□□□ 0.25
P01734 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.61■□□□□ 0.25
P01734 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.61■□□□□ 0.25
P01734 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01734 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
P01734 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01734 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
P01734 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.61■□□□□ 0.25
P01734 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
P01734 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01734 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01734 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01734 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01734 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
P01734 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
P01734 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01734 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.61■□□□□ 0.25
P01734 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.61■□□□□ 0.25
P01734 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.61■□□□□ 0.25
P01734 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.61■□□□□ 0.25
P01734 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01734 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01734 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
P01734 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01734 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01734 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01734 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01734 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01734 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms