Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Vti1aO89116 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.51■□□□□ 0.23
Vti1aO89116 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vti1aO89116 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vti1aO89116 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vti1aO89116 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vti1aO89116 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vti1aO89116 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.5■□□□□ 0.23
Vti1aO89116 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vti1aO89116 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vti1aO89116 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vti1aO89116 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.5■□□□□ 0.23
Vti1aO89116 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.5■□□□□ 0.23
Vti1aO89116 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Vti1aO89116 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vti1aO89116 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.5■□□□□ 0.23
Vti1aO89116 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.5■□□□□ 0.23
Vti1aO89116 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vti1aO89116 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.5■□□□□ 0.23
Vti1aO89116 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.5■□□□□ 0.23
Vti1aO89116 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vti1aO89116 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Vti1aO89116 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Vti1aO89116 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vti1aO89116 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vti1aO89116 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vti1aO89116 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vti1aO89116 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vti1aO89116 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vti1aO89116 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vti1aO89116 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vti1aO89116 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vti1aO89116 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vti1aO89116 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vti1aO89116 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vti1aO89116 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vti1aO89116 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vti1aO89116 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.49■□□□□ 0.23
Vti1aO89116 Gm14701-201ENSMUST00000117156 348 ntBASIC16.49■□□□□ 0.23
Vti1aO89116 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vti1aO89116 Gm6257-201ENSMUST00000163864 910 ntBASIC16.49■□□□□ 0.23
Vti1aO89116 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vti1aO89116 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.49■□□□□ 0.23
Vti1aO89116 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vti1aO89116 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vti1aO89116 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vti1aO89116 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Vti1aO89116 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vti1aO89116 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vti1aO89116 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vti1aO89116 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vti1aO89116 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vti1aO89116 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vti1aO89116 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vti1aO89116 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.48■□□□□ 0.23
Vti1aO89116 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Vti1aO89116 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Vti1aO89116 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.48■□□□□ 0.23
Vti1aO89116 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.48■□□□□ 0.23
Vti1aO89116 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Vti1aO89116 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.48■□□□□ 0.23
Vti1aO89116 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.48■□□□□ 0.23
Vti1aO89116 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.48■□□□□ 0.23
Vti1aO89116 Gm44492-201ENSMUST00000197012 141 ntBASIC16.48■□□□□ 0.23
Vti1aO89116 Gm9682-201ENSMUST00000197505 556 ntBASIC16.48■□□□□ 0.23
Vti1aO89116 Chchd1-203ENSMUST00000224633 557 ntBASIC16.48■□□□□ 0.23
Vti1aO89116 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.48■□□□□ 0.23
Vti1aO89116 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vti1aO89116 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vti1aO89116 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vti1aO89116 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.47■□□□□ 0.23
Vti1aO89116 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vti1aO89116 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vti1aO89116 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vti1aO89116 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.47■□□□□ 0.23
Vti1aO89116 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vti1aO89116 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vti1aO89116 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Vti1aO89116 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms