Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
CopeO89079 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CopeO89079 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.82■□□□□ 0.12
CopeO89079 Gm13312-201ENSMUST00000119631 718 ntBASIC15.82■□□□□ 0.12
CopeO89079 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CopeO89079 Gm45328-201ENSMUST00000210942 917 ntBASIC15.82■□□□□ 0.12
CopeO89079 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CopeO89079 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
CopeO89079 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CopeO89079 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CopeO89079 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
CopeO89079 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CopeO89079 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.82■□□□□ 0.12
CopeO89079 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CopeO89079 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.81■□□□□ 0.12
CopeO89079 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CopeO89079 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CopeO89079 Gm14722-201ENSMUST00000118943 689 ntBASIC15.81■□□□□ 0.12
CopeO89079 Gm11950-201ENSMUST00000121615 838 ntBASIC15.81■□□□□ 0.12
CopeO89079 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CopeO89079 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CopeO89079 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CopeO89079 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CopeO89079 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.81■□□□□ 0.12
CopeO89079 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CopeO89079 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.81■□□□□ 0.12
CopeO89079 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CopeO89079 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CopeO89079 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CopeO89079 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CopeO89079 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CopeO89079 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CopeO89079 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.81■□□□□ 0.12
CopeO89079 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CopeO89079 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CopeO89079 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CopeO89079 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CopeO89079 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CopeO89079 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CopeO89079 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CopeO89079 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CopeO89079 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CopeO89079 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CopeO89079 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CopeO89079 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CopeO89079 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.8■□□□□ 0.12
CopeO89079 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.8■□□□□ 0.12
CopeO89079 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CopeO89079 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CopeO89079 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CopeO89079 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CopeO89079 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CopeO89079 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CopeO89079 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CopeO89079 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CopeO89079 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CopeO89079 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CopeO89079 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CopeO89079 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CopeO89079 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CopeO89079 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CopeO89079 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.79■□□□□ 0.12
CopeO89079 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CopeO89079 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CopeO89079 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CopeO89079 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CopeO89079 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CopeO89079 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CopeO89079 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CopeO89079 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CopeO89079 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CopeO89079 Gm6345-202ENSMUST00000180900 204 ntBASIC15.79■□□□□ 0.12
CopeO89079 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.79■□□□□ 0.12
CopeO89079 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CopeO89079 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CopeO89079 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CopeO89079 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CopeO89079 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CopeO89079 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.79■□□□□ 0.12
CopeO89079 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms