Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syn1O88935 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syn1O88935 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Syn1O88935 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syn1O88935 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syn1O88935 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syn1O88935 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Syn1O88935 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syn1O88935 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syn1O88935 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syn1O88935 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syn1O88935 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Syn1O88935 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syn1O88935 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Syn1O88935 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Syn1O88935 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syn1O88935 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Syn1O88935 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syn1O88935 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Syn1O88935 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.71■□□□□ 0.11
Syn1O88935 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syn1O88935 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Syn1O88935 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Syn1O88935 Gm8602-201ENSMUST00000184045 607 ntBASIC15.71■□□□□ 0.11
Syn1O88935 Gm38225-201ENSMUST00000194001 393 ntBASIC15.71■□□□□ 0.11
Syn1O88935 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.71■□□□□ 0.11
Syn1O88935 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.71■□□□□ 0.11
Syn1O88935 Gm9063-201ENSMUST00000223299 582 ntBASIC15.71■□□□□ 0.11
Syn1O88935 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.71■□□□□ 0.11
Syn1O88935 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syn1O88935 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Syn1O88935 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syn1O88935 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Syn1O88935 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Syn1O88935 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.71■□□□□ 0.1
Syn1O88935 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Syn1O88935 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Syn1O88935 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Syn1O88935 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Syn1O88935 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Syn1O88935 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.7■□□□□ 0.1
Syn1O88935 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.7■□□□□ 0.1
Syn1O88935 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 Gm25144-201ENSMUST00000179561 110 ntBASIC15.7■□□□□ 0.1
Syn1O88935 Gm25352-201ENSMUST00000179815 110 ntBASIC15.7■□□□□ 0.1
Syn1O88935 Gm27838-201ENSMUST00000184829 128 ntBASIC15.7■□□□□ 0.1
Syn1O88935 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.7■□□□□ 0.1
Syn1O88935 Gm6218-201ENSMUST00000219812 628 ntBASIC15.7■□□□□ 0.1
Syn1O88935 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.7■□□□□ 0.1
Syn1O88935 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.7■□□□□ 0.1
Syn1O88935 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.7■□□□□ 0.1
Syn1O88935 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.7■□□□□ 0.1
Syn1O88935 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Syn1O88935 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syn1O88935 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Syn1O88935 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syn1O88935 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Syn1O88935 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syn1O88935 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syn1O88935 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.69■□□□□ 0.1
Syn1O88935 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syn1O88935 Gm2810-201ENSMUST00000118681 990 ntBASIC15.69■□□□□ 0.1
Syn1O88935 Gm11543-201ENSMUST00000120758 370 ntBASIC15.69■□□□□ 0.1
Syn1O88935 Gm14767-201ENSMUST00000121559 586 ntBASIC15.69■□□□□ 0.1
Syn1O88935 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Syn1O88935 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Syn1O88935 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syn1O88935 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syn1O88935 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Syn1O88935 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.69■□□□□ 0.1
Syn1O88935 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syn1O88935 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syn1O88935 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syn1O88935 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syn1O88935 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.69■□□□□ 0.1
Syn1O88935 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syn1O88935 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Syn1O88935 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Syn1O88935 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Syn1O88935 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Syn1O88935 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms