Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.74□□□□□ -0.21
Hdac3O88895 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.74□□□□□ -0.21
Hdac3O88895 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC13.74□□□□□ -0.21
Hdac3O88895 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Hdac3O88895 Gm17807-201ENSMUST00000186869 298 ntBASIC13.74□□□□□ -0.21
Hdac3O88895 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Hdac3O88895 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hdac3O88895 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hdac3O88895 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hdac3O88895 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hdac3O88895 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Hdac3O88895 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hdac3O88895 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hdac3O88895 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hdac3O88895 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hdac3O88895 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hdac3O88895 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hdac3O88895 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.73□□□□□ -0.21
Hdac3O88895 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Hdac3O88895 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hdac3O88895 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hdac3O88895 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.73□□□□□ -0.21
Hdac3O88895 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.73□□□□□ -0.21
Hdac3O88895 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC13.73□□□□□ -0.21
Hdac3O88895 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC13.73□□□□□ -0.21
Hdac3O88895 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.73□□□□□ -0.21
Hdac3O88895 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hdac3O88895 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hdac3O88895 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.73□□□□□ -0.21
Hdac3O88895 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hdac3O88895 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hdac3O88895 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Hdac3O88895 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hdac3O88895 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdac3O88895 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Hdac3O88895 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hdac3O88895 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdac3O88895 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdac3O88895 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdac3O88895 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdac3O88895 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdac3O88895 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdac3O88895 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hdac3O88895 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdac3O88895 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Hdac3O88895 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdac3O88895 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Hdac3O88895 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Hdac3O88895 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.72□□□□□ -0.21
Hdac3O88895 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hdac3O88895 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hdac3O88895 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdac3O88895 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdac3O88895 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hdac3O88895 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdac3O88895 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Hdac3O88895 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdac3O88895 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdac3O88895 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hdac3O88895 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Hdac3O88895 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Hdac3O88895 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Hdac3O88895 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdac3O88895 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Hdac3O88895 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
Hdac3O88895 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdac3O88895 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdac3O88895 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Hdac3O88895 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.71□□□□□ -0.21
Hdac3O88895 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdac3O88895 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Hdac3O88895 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Hdac3O88895 Gm15165-201ENSMUST00000118140 502 ntBASIC13.71□□□□□ -0.21
Hdac3O88895 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC13.71□□□□□ -0.21
Hdac3O88895 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hdac3O88895 Gm21362-201ENSMUST00000194272 928 ntBASIC13.71□□□□□ -0.21
Hdac3O88895 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.71□□□□□ -0.21
Hdac3O88895 Gm18669-201ENSMUST00000216049 778 ntBASIC13.71□□□□□ -0.21
Hdac3O88895 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.71□□□□□ -0.21
Hdac3O88895 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdac3O88895 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Hdac3O88895 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdac3O88895 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hdac3O88895 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdac3O88895 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms