Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Gm38058-201ENSMUST00000194323 4368 ntBASIC10.87□□□□□ -0.67
Sh2d1aO88890 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh2d1aO88890 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC10.86□□□□□ -0.67
Sh2d1aO88890 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Gm8349-201ENSMUST00000182720 1003 ntBASIC10.86□□□□□ -0.67
Sh2d1aO88890 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC10.86□□□□□ -0.67
Sh2d1aO88890 AC127349.1-201ENSMUST00000224590 266 ntBASIC10.86□□□□□ -0.67
Sh2d1aO88890 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sh2d1aO88890 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC10.85□□□□□ -0.67
Sh2d1aO88890 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Gm25745-201ENSMUST00000174945 133 ntBASIC10.85□□□□□ -0.67
Sh2d1aO88890 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Cmtm5-203ENSMUST00000227441 610 ntBASIC10.85□□□□□ -0.67
Sh2d1aO88890 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Gm7367-201ENSMUST00000057611 492 ntBASIC10.85□□□□□ -0.67
Sh2d1aO88890 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Sh2d1aO88890 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Sh2d1aO88890 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sh2d1aO88890 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms