Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Best1O88870 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Best1O88870 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Best1O88870 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Best1O88870 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Best1O88870 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Best1O88870 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.67□□□□□ -0.06
Best1O88870 Gm16026-204ENSMUST00000162652 683 ntBASIC14.67□□□□□ -0.06
Best1O88870 Gm43767-201ENSMUST00000198933 381 ntBASIC14.67□□□□□ -0.06
Best1O88870 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.67□□□□□ -0.06
Best1O88870 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Best1O88870 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Best1O88870 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Best1O88870 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Best1O88870 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Best1O88870 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Best1O88870 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Best1O88870 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Best1O88870 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Best1O88870 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Best1O88870 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Best1O88870 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Best1O88870 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Best1O88870 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Best1O88870 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Best1O88870 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Best1O88870 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Best1O88870 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Best1O88870 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Best1O88870 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Best1O88870 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Best1O88870 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Best1O88870 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Best1O88870 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Best1O88870 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Best1O88870 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Best1O88870 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Best1O88870 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.66□□□□□ -0.06
Best1O88870 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.66□□□□□ -0.06
Best1O88870 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.66□□□□□ -0.06
Best1O88870 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.66□□□□□ -0.06
Best1O88870 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.66□□□□□ -0.06
Best1O88870 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.66□□□□□ -0.06
Best1O88870 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.66□□□□□ -0.06
Best1O88870 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Best1O88870 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Best1O88870 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Best1O88870 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Best1O88870 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Best1O88870 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Best1O88870 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Best1O88870 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Best1O88870 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Best1O88870 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Best1O88870 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.65□□□□□ -0.06
Best1O88870 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Best1O88870 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Best1O88870 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Best1O88870 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Best1O88870 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.65□□□□□ -0.06
Best1O88870 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Best1O88870 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.65□□□□□ -0.06
Best1O88870 Rprl2-201ENSMUST00000157150 290 ntBASIC14.65□□□□□ -0.06
Best1O88870 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Best1O88870 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Best1O88870 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Best1O88870 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Best1O88870 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Best1O88870 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Best1O88870 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Best1O88870 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Best1O88870 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Best1O88870 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Best1O88870 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Best1O88870 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Best1O88870 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Best1O88870 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Best1O88870 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Best1O88870 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Best1O88870 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
Best1O88870 Prob1-201ENSMUST00000097619 3021 ntBASIC14.64□□□□□ -0.07
Best1O88870 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Best1O88870 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.64□□□□□ -0.07
Best1O88870 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.64□□□□□ -0.07
Best1O88870 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Best1O88870 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Best1O88870 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.64□□□□□ -0.07
Best1O88870 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Best1O88870 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Best1O88870 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Best1O88870 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.64□□□□□ -0.07
Best1O88870 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Best1O88870 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Best1O88870 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Best1O88870 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.64□□□□□ -0.07
Best1O88870 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.64□□□□□ -0.07
Best1O88870 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.64□□□□□ -0.07
Best1O88870 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Best1O88870 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Best1O88870 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms