Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ShdO88834 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ShdO88834 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ShdO88834 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ShdO88834 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.65■□□□□ 0.1
ShdO88834 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.65■□□□□ 0.1
ShdO88834 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ShdO88834 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ShdO88834 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.65■□□□□ 0.1
ShdO88834 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ShdO88834 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ShdO88834 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ShdO88834 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ShdO88834 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ShdO88834 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ShdO88834 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
ShdO88834 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ShdO88834 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ShdO88834 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ShdO88834 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ShdO88834 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ShdO88834 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ShdO88834 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
ShdO88834 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ShdO88834 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ShdO88834 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ShdO88834 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.64■□□□□ 0.09
ShdO88834 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ShdO88834 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ShdO88834 Gm7230-201ENSMUST00000173026 815 ntBASIC15.64■□□□□ 0.09
ShdO88834 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.64■□□□□ 0.09
ShdO88834 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ShdO88834 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ShdO88834 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ShdO88834 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
ShdO88834 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
ShdO88834 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ShdO88834 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ShdO88834 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ShdO88834 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ShdO88834 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ShdO88834 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
ShdO88834 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ShdO88834 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ShdO88834 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ShdO88834 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ShdO88834 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.63■□□□□ 0.09
ShdO88834 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
ShdO88834 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
ShdO88834 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
ShdO88834 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ShdO88834 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.63■□□□□ 0.09
ShdO88834 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
ShdO88834 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ShdO88834 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
ShdO88834 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
ShdO88834 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
ShdO88834 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
ShdO88834 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
ShdO88834 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
ShdO88834 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
ShdO88834 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ShdO88834 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ShdO88834 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ShdO88834 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ShdO88834 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.62■□□□□ 0.09
ShdO88834 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
ShdO88834 Gm18195-201ENSMUST00000207604 706 ntBASIC15.62■□□□□ 0.09
ShdO88834 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.62■□□□□ 0.09
ShdO88834 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ShdO88834 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
ShdO88834 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ShdO88834 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ShdO88834 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ShdO88834 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.62■□□□□ 0.09
ShdO88834 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
ShdO88834 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
ShdO88834 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ShdO88834 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.62■□□□□ 0.09
ShdO88834 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
ShdO88834 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
ShdO88834 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ShdO88834 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ShdO88834 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ShdO88834 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
ShdO88834 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
ShdO88834 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ShdO88834 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
ShdO88834 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.61■□□□□ 0.09
ShdO88834 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.61■□□□□ 0.09
ShdO88834 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
ShdO88834 Gm6550-201ENSMUST00000187574 993 ntBASIC15.61■□□□□ 0.09
ShdO88834 Gm37153-201ENSMUST00000193637 231 ntBASIC15.61■□□□□ 0.09
ShdO88834 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.61■□□□□ 0.09
ShdO88834 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ShdO88834 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.61■□□□□ 0.09
ShdO88834 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
ShdO88834 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.61■□□□□ 0.09
ShdO88834 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
ShdO88834 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms