Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Gm25406-201ENSMUST00000157599 105 ntBASIC14.31□□□□□ -0.12
Tulp3O88413 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.31□□□□□ -0.12
Tulp3O88413 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.31□□□□□ -0.12
Tulp3O88413 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tulp3O88413 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tulp3O88413 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Tulp3O88413 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Tulp3O88413 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.3□□□□□ -0.12
Tulp3O88413 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.3□□□□□ -0.12
Tulp3O88413 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
Tulp3O88413 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.3□□□□□ -0.12
Tulp3O88413 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.3□□□□□ -0.12
Tulp3O88413 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.3□□□□□ -0.12
Tulp3O88413 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Tulp3O88413 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.3□□□□□ -0.12
Tulp3O88413 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Tulp3O88413 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Tulp3O88413 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tulp3O88413 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.29□□□□□ -0.12
Tulp3O88413 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Tulp3O88413 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.29□□□□□ -0.12
Tulp3O88413 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Tulp3O88413 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tulp3O88413 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Tulp3O88413 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tulp3O88413 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tulp3O88413 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tulp3O88413 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Tulp3O88413 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tulp3O88413 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tulp3O88413 Gm12134-201ENSMUST00000122109 520 ntBASIC14.29□□□□□ -0.12
Tulp3O88413 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tulp3O88413 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tulp3O88413 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.29□□□□□ -0.12
Tulp3O88413 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Tulp3O88413 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.29□□□□□ -0.12
Tulp3O88413 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Tulp3O88413 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tulp3O88413 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tulp3O88413 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tulp3O88413 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tulp3O88413 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tulp3O88413 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Tulp3O88413 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tulp3O88413 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tulp3O88413 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tulp3O88413 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tulp3O88413 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tulp3O88413 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.29□□□□□ -0.12
Tulp3O88413 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tulp3O88413 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tulp3O88413 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tulp3O88413 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tulp3O88413 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tulp3O88413 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tulp3O88413 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tulp3O88413 Gm14722-201ENSMUST00000118943 689 ntBASIC14.28□□□□□ -0.12
Tulp3O88413 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Tulp3O88413 Gm6623-201ENSMUST00000173570 544 ntBASIC14.28□□□□□ -0.12
Tulp3O88413 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms