Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubr1O70481 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubr1O70481 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Ubr1O70481 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ubr1O70481 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubr1O70481 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubr1O70481 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubr1O70481 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubr1O70481 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ubr1O70481 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ubr1O70481 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ubr1O70481 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Ubr1O70481 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ubr1O70481 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Ubr1O70481 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ubr1O70481 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ubr1O70481 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ubr1O70481 Gm7488-201ENSMUST00000117148 684 ntBASIC19.64■□□□□ 0.73
Ubr1O70481 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ubr1O70481 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Ubr1O70481 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Ubr1O70481 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC19.64■□□□□ 0.73
Ubr1O70481 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ubr1O70481 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
Ubr1O70481 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ubr1O70481 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ubr1O70481 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC19.64■□□□□ 0.73
Ubr1O70481 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ubr1O70481 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubr1O70481 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubr1O70481 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubr1O70481 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
Ubr1O70481 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Ubr1O70481 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubr1O70481 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubr1O70481 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubr1O70481 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubr1O70481 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubr1O70481 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubr1O70481 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ubr1O70481 Gm16215-201ENSMUST00000161990 637 ntBASIC19.62■□□□□ 0.73
Ubr1O70481 Gm45098-201ENSMUST00000207179 657 ntBASIC19.62■□□□□ 0.73
Ubr1O70481 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Ubr1O70481 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC19.62■□□□□ 0.73
Ubr1O70481 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubr1O70481 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubr1O70481 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubr1O70481 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubr1O70481 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ubr1O70481 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubr1O70481 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubr1O70481 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubr1O70481 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubr1O70481 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubr1O70481 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC19.62■□□□□ 0.73
Ubr1O70481 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC19.62■□□□□ 0.73
Ubr1O70481 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubr1O70481 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubr1O70481 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ubr1O70481 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ubr1O70481 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ubr1O70481 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubr1O70481 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ubr1O70481 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubr1O70481 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC19.61■□□□□ 0.73
Ubr1O70481 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ubr1O70481 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubr1O70481 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubr1O70481 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC19.61■□□□□ 0.73
Ubr1O70481 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC19.61■□□□□ 0.73
Ubr1O70481 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubr1O70481 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubr1O70481 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubr1O70481 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ubr1O70481 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ubr1O70481 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ubr1O70481 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ubr1O70481 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ubr1O70481 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Ubr1O70481 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ubr1O70481 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC19.6■□□□□ 0.73
Ubr1O70481 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ubr1O70481 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ubr1O70481 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ubr1O70481 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ubr1O70481 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ubr1O70481 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ubr1O70481 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ubr1O70481 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ubr1O70481 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ubr1O70481 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ubr1O70481 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC19.6■□□□□ 0.73
Ubr1O70481 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ubr1O70481 Gm3365-201ENSMUST00000216296 1480 ntBASIC19.6■□□□□ 0.73
Ubr1O70481 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ubr1O70481 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC19.6■□□□□ 0.73
Ubr1O70481 Gm6222-201ENSMUST00000120787 396 ntBASIC19.6■□□□□ 0.73
Ubr1O70481 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Ubr1O70481 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ubr1O70481 Shd-206ENSMUST00000225145 998 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms